Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413738
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Entry
139413738 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139413738
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139413738
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139413738
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139413738
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139413738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
139413738
NCBI-ProteinID:
XP_071017556
LinkDB
All DBs
Position
7:68650768..68672404
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AA seq
1056 aa
AA seq
DB search
MARHTMAPRVQLEKAAWRWVDSVRPEDIHREHIEIAYRICVPPCKRGACRRNCKGNPNCL
VGIGEHAWLGEINENSFHNIDDPNSERRDENTFVGLTNLGATCYVNTFLQVWFHNLVLRR
TLYLCQNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQ
DAQEFSKLFLSLLEDTLSKQKNPNLQNVIQLQFCGQMSYVTVCNQCGRASPLPSRYYELE
LNIQGHKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNATRRIKLHSLPHVLNLQLMRFV
FDRQTGHKKKLNTFISFPEQLDMGPFLEGKEDEKCVYELSAVLIHRGVSAYSGHYIAHVR
DARTSDWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYK
CHREEDTDPMETNVDVPGFLQRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELY
ELLPAEDGQQYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAA
ELLFDRYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLAKGPPKSDEGYWVG
KTSLRSWRQLALEQLDEDEEETKHIDGKTNGEGPEITATKEYGPENQDEDEEEMKTFNED
ILCRHGGLSILESERRLVTEEVWSKLRVYFPRAPQFTQLQEPCQQCLRLEREGKENEALN
RMMASEQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRKFIRRPTKTTPVSSV
GNSLLLCPHGGFMFTHDSMLMGDAQHIALLWPGEWEVISRHFLVDQPISICRISQATPNG
SSVEYTTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLMEAAPEVNVSGSEA
EDEREEPVTKVDGERDPDFSQIEDGAKRQRLSDSTIGAAASPAPMASGGKSGIRRSTRHR
KLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESV
ICLKADEPIADYAALDDVYQVCMPEEGFKGTGLLGH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcatacaatggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtc
gactcggtgagaccggaggacatacaccgggaacatattgagatagcttaccgaatctgt
gtaccgccgtgcaagaggggagcatgcaggaggaattgtaaagggaacccaaattgtctt
gtcggtattggggaacatgcctggttgggagagataaacgaaaacagcttccacaacatt
gatgatccaaattcagagcgccgggacgagaacacgtttgtgggtctgacgaacctgggc
gccacgtgttatgtcaacaccttcctgcaggtgtggttccacaacctggtgctgcgcagg
accctgtacctgtgtcagaatgcccgggcagaggagcacaacatggactcagactatgag
cctcgcagcatatgtgaacacctgcagtacctgtttgcactgcttcagaacagcaacaga
aggtacattgacccctcggggctggtcaaggcgctagggctggacacaggacaacagcag
gacgctcaagagttctccaaactcttcctttcgctattggaggacacattatccaaacag
aagaacccaaacctgcagaatgtcatacagctgcaattctgtggacagatgtcttacgtc
actgtgtgtaaccagtgtggccgcgcttctccactgccgtcccgatactacgaactggag
ctcaacatccagggccacaagaaccttacagaatgtgtcacagagtttctcaaggaggag
aagctggacggtgacaaccgctacttctgtgagagctgccagagcaaacagaacgccact
cgacgcatcaaactgcacagcctcccacacgtactaaacctgcagctcatgcgttttgtc
ttcgacagacaaacgggtcacaagaagaagctcaacaccttcatcagttttccagagcag
ctggacatgggcccgtttctggagggaaaagaagatgagaagtgtgtgtacgagctgagt
gcggtcctgatccaccgcggggtcagcgcttactcgggtcactacattgcacacgtgcga
gacgcccgcaccagcgactggtacaagttcaacgatgaggagattgagaagatggagggc
aagaagctacaactgggcatcgaggaggacatcgctgagacggtgaagtcccagacccgt
aagcccaagtgcagtaaaggataccactgctccaggaacgcctacatgctggtgtacaag
tgccatagagaggaggacactgaccccatggagaccaacgttgacgtgccaggctttcta
cagaggctggtggaccgagacaacaggaagtttgaggagtggtgcctggagatggccgac
atgcgcaagcagagcgtcgacaagggcaaggccaagcacgaagaggtgaaggaactctac
gagcttttacctgcggaagacggccagcagtatgagtttgtgcctctggagtggttgaag
aaatggctggacgactcgacggtcactaaagaaatcgacaatggcaacttcctctgttct
catggtaaacttcacccagacaaggtgggggaggccaagaggatctctgttaaagcggca
gagcttctctttgacagatacggcggaggacccagactagatgggtcaactctctgtgag
gaatgtgtgggccagagatgcagggtgctgcggctaaagaaccagctggcagaggactac
aaagaagtcaccaaccttgccaagggcccgcccaaaagtgatgaggggtactgggtgggc
aagacgtctcttcggagctggagacagctggccttggagcagctggatgaggacgaggag
gagaccaaacacatcgacggcaaaaccaacggagagggaccagagatcactgctactaaa
gagtacggcccagagaaccaggatgaagacgaggaggagatgaagaccttcaacgaggac
atcctctgtcggcatggtggcctgagtatcctggagagcgagaggcggctggtgacggag
gaggtgtggtccaaactgagggtgtatttccccagagccccccagttcacccagctacag
gagccctgtcagcagtgcctgaggctggagcgtgaggggaaggagaatgaggctctgaac
aggatgatggcgtcagaacagaagagctccctcctcaacctgttccaggagaagaacaga
cccacactcaccaagtggccgcaggagacggacattctctacatagttcctctgtttttt
gtggacgagtggagaaagttcatcaggaggcccactaagaccaccccagtgtctagcgtg
gggaacagtttgctcctttgtccccatgggggcttcatgttcacccatgactccatgttg
atgggagacgcccaacatatagctcttctctggcccggtgaatgggaggtgatcagcaga
cacttcctggttgatcagccaatctccatctgccggatcagtcaggccacacccaacggc
tccagtgtggagtacaccacccagcctgagctttgtagggactgcagagaaggcttcatc
ttccagcaacagagggacatgagagagtacgcacaagccacagtctacgtccgcaaggtc
atagacgacaagaggctaatggaggcagctcctgaggtgaatgtgagtgggtcggaggca
gaggatgagagggaggagcctgttactaaggtggatggagagcgagaccctgactttagc
cagatagaggacggggcaaagcgtcagaggctgagtgacagcaccatcggtgctgccgca
agtccagcccccatggccagtggcggcaaatcaggtatcaggaggagcacaaggcacagg
aagctccggggagagaaagcactcatcgtctcagccaatcagacgctcaaggagctcaaa
atacaaatcatgcatgccttctctgtggccccgtttgatcagaacctgtcgatcgacggc
cggtgtctaacggatgactctgccaccctcggcagcctaggagtcatcccagagagcgtc
atctgtctgaaggctgatgaacccatagcagattatgcagcattggatgacgtttatcag
gtctgtatgcctgaagaaggatttaaaggcactgggcttctcggtcactga
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integrated database retrieval system
