Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413797
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Entry
139413797 CDS
T10872
Name
(RefSeq) syntaxin-18-like isoform X1
KO
K08492
syntaxin 18
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139413797
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139413797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139413797
Membrane trafficking [BR:
ocla04131
]
SNARE
Syntaxin (Qa)
Stx-rER
139413797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
GAIN
DUF6331
ACR_tran
DUF7165
DUF4559
Motif
Other DBs
NCBI-GeneID:
139413797
NCBI-ProteinID:
XP_071017664
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Position
7:complement(71184267..71223465)
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AA seq
331 aa
AA seq
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MAVDITLLFKASVKTVKTRNKAMGVVFDLPKDEIFKKSRPNNGFSLKAKEVISNITKLKD
FLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKRVIST
QIKEHRGAVLDLIEMYLKGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHHHSRMVVEKSPQ
VEQHSEEKTSKEESSSGERSVMEVPENTVSLWEEGQGRVDDELSPEEMQMFEQENQRLVS
EMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDSIHQLVVGATENVKEGNEDIRE
AIQNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactttactgttcaaagccagtgtaaaaacggtcaaaacccgaaat
aaagctatgggagtagtgtttgatttgcctaaagatgaaatattcaagaagagcagaccg
aataacggattttctctcaaggcgaaagaagtgatctctaacatcaccaagctgaaagac
tttctactgcagcacaggaaggactatgtgaatgctggaagtctcatctcatcagatcta
acccggatgacagacaatgagcgagaccagatcgaccaggacgcccagatcttcatgaga
acctgctctgaagccatcaagcagctccgctctgaagctgagaaacgggtcatatcgacc
cagattaaagagcacaggggggcggtcctcgacctaatcgagatgtatttgaaaggagta
tgcaagctttattccgagcagagggctatacgagtgaagagagtggtagacaagaagaga
ctgtcccgactagagccagagcaccaccacagtaggatggtggtggagaagagcccacag
gtggaacagcacagcgaggagaaaacatccaaggaggagagcagcagcggtgagcggagc
gtgatggaggtcccggagaacactgtgagcctgtgggaggagggccagggtcgtgtggat
gacgagctctcacctgaggagatgcagatgtttgaacaggagaaccagaggctggtgagt
gagatgagcaacctagtagatgaagtcaggcaaatcgaaggcaaggttgtcgaaatctca
cgtctccaggagatttttgcggagaaggtgctaatgcaagaaactgagatagacagtatc
catcagctagtcgtgggagccactgaaaacgtcaaagagggaaacgaggacatccgagag
gccatccaaaacaatgctggattccgtgtctggattctcttcttccttgtcatgtgctca
ttctctctgctcttcctggattggtatgacagctaa
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