Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413874
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Entry
139413874 CDS
T10872
Name
(RefSeq) integrin alpha-7-like isoform X1
KO
K06583
integrin alpha 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139413874
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139413874
09142 Cell motility
04820 Cytoskeleton in muscle cells
139413874
04810 Regulation of actin cytoskeleton
139413874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139413874
04515 Cell adhesion molecules [BR:
ocla04515
]
139413874
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139413874
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin alpha subunits
139413874
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
DUF7507
CC2D2AN-C2
Motif
Other DBs
NCBI-GeneID:
139413874
NCBI-ProteinID:
XP_071017806
LinkDB
All DBs
Position
7:complement(77864357..77930659)
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AA seq
1123 aa
AA seq
DB search
MAPHLRHGFSVSLLQRRCLVLHSLLLSVYFLTVAGFNLDTSMTLTKEGETGSFFGFSLAL
HQQLTPEPHSWILVGAPRARGLGMMQRKRPGALYRCPITGEEFDCERVDIDGDVNLDWES
KDNQWLGVTVKSQGIGGKVVTCAHLYELRQRVGLPSETRDPIGRCYVLSEDLTERDDLDG
GEWKFCEGRPQGHEQFGFCQQGLSAAFTPDNQFIMFGAPGTYNWKGEMRVQLLNQTLLDL
GFYDDGPYEVADEKQLNAQLIPVPYHSYLGFSVDSAKGIMSRGELTFVAGAPRANHTGAV
VLLRKDNVYRLVPQHILWGEELASSFGYSVATADLNSDGWTDLIVGAPNYFDRKAEIGGA
VYIFLNPFGNWEYAQPIRLNGTYDSMFGLTVNNVGDLDRDGYDDIAVGAPFDGEGKVFIY
RGLSSGIDTKPAQILDGVDEGVKRFGYSISGGLDIDGNLYPDLAVGSLGDKLVLYRSRPV
IHVTRDVSIEPQQYIDLEQHNCKGRDGVCVEVKACFTYTAYPETYSPDITLVLLIEADTE
RRKLGLPHRVSFLGRSAQAAEYTHTDEVELKGQRHPACQSATFQLNDNIRDKLRPISLAI
THTIRPPMFSSDTNPEERDTLPPVLSVSTSNTLHSEVNFLREGCGDDKICQSNLKLTYQF
GTRPPTSDLFTPLPRDDEEVAVFSLSDQRSVVLEVTVTNMPSDPLSPEEDGDDAHAAQLL
VTLPDTLSYSGFRGQQVVCQANQNGSQAECELGNPLKRDAILKFYIILSTSAITIETTEL
TVNLLLATISEQRDLATVTAVAKIIIELPLAVSVLARPHQLFFSGAVKGESAMETLDDVG
SAVEFEFTVTNTGPSLQTLGSAFLNIMWPHELSNGKWLLYPTALHFHGHPETPCTPHTSL
NPRKFSHSSPSDDQPQAAGLKARRKGRSNPEEEGHVMTKGSLGRTTPAVAASERRKSLKL
DCLLGSARCVLFQCPLHSFSDSAVLKIQGRLWNSTFLEEFPSVSALELLVRANITVKSSI
KHLVLRDAAAQVPVMIYPEVGLTAQYWVPWWWILIAILAGILVLSLLVCILWKCGFFRRV
QYEDKVPQYHAVKIPRQDRPQFQQKAGILQKKEWATHWSDGSS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacatctgagacatggattctcggtctctcttttacagcgccggtgtctcgtc
ctccattctctccttctctccgtctatttcctgactgttgcagggttcaacctggatact
agcatgactctgaccaaggagggggagaccggaagcttttttggattctctttagcgctt
caccagcaactcacaccagaaccacacagttggatcctggtgggggcgccgcgggccaga
ggactgggcatgatgcagaggaagcgccctggcgctctgtaccgctgtccaatcacaggc
gaggagtttgactgcgagcgcgtggacatcgatggagacgtaaacctggactgggaaagc
aaggacaaccagtggctaggagtaacagtcaagagccaggggattggaggaaaggtggtg
acgtgtgcccatctgtacgagctgcgtcagcgcgtgggcctgccgtcggagacgcgggac
cccatcgggcgttgctacgtgctcagtgaggacctgaccgagagggatgacctagacgga
ggggagtggaagttctgtgagggtcgaccccagggacacgaacagtttggcttctgtcag
cagggtctgtctgctgccttcacacccgacaaccagtttatcatgttcggagctcctgga
acgtacaactggaaaggagagatgcgcgtccagctactaaaccagactttactggatctg
ggtttctatgacgacgggccctatgaagtggcagatgagaaacagctgaatgctcagctg
atccctgttccctaccatagttacctgggcttctcagtggactctgctaaaggcataatg
agtcgtggtgagctgaccttcgtggcgggggctccgagagccaatcacacgggagcggtg
gtgctactgcgtaaagataacgtgtaccgcctggtgccacagcacatcctgtggggagag
gagctggcttcttccttcgggtactctgtggctacggctgatctcaacagtgacggctgg
acagacctgatagtgggagctcctaactactttgaccgaaaagcagagatcggaggtgct
gtgtacatcttcctcaacccattcggtaactgggaatatgctcagccaatcaggctcaat
ggaacctatgactccatgtttggattgaccgtcaacaacgtgggagacttggacagggac
ggatatgacgacatcgctgtgggggctccgttcgatggggaaggcaaagtgttcatctac
cgaggcttgtcctcaggcatcgacaccaagcctgcacagatcctggatggagtggacgag
ggggtgaagaggttcggctactccatctcaggaggtctggacatcgatgggaacctgtac
cctgacctggcagtaggctctctcggtgataagctagttctgtacaggtctcgcccggtc
attcacgtgacccgggatgtatccatcgaacctcagcagtatattgacttggagcaacac
aactgcaaggggagagatggagtttgtgtggaggtcaaagcctgcttcacctatactgct
tacccagagacctactcaccagacatcaccctggttctactcatcgaggctgacacagag
cgcaggaagctcggcctgccccaccgtgttagcttcctgggtcgcagtgcacaggcggcg
gagtacacacacactgacgaggtggagctgaaaggtcaacgccatcccgcctgccagagc
gccaccttccaactaaacgacaatatccgtgataagctgcgtcccatctctctggccatc
acccacaccatcagaccccccatgttctcctcagacactaacccagaggaacgagacacg
ctacctcctgtactgagtgtttctacttccaacaccctacactctgaggtgaatttcctg
agggaaggctgtggcgatgataagatctgtcagagcaacctgaagttgacctaccagttt
ggaacccgacctcccacctctgacctcttcacccctctgccaagggatgatgaagaggtg
gcggtgttctctctgtctgatcagaggtctgtggtgttggaggtgaccgtcaccaacatg
ccctcagaccctctgtccccagaggaggatggagatgatgcccatgctgcccaactactg
gtgaccctgccagacaccctgtcctactctggcttcaggggacaacaggtggtgtgccag
gccaatcagaacgggtctcaggcggagtgcgagctgggaaacccgctgaagagagatgct
atactgaaattctacatcatcctcagcacgtctgctatcaccatagagaccacggaactc
actgtcaacctcctgttggctaccatcagtgaacagcgagacctggccacagtcacagcc
gtggctaaaatcatcatagagctccccctggctgtcagtgtgctggccagaccacaccag
ctgttcttcagtggggccgtaaagggggagagtgccatggagaccctggacgatgtcggg
agtgctgtggagtttgagtttacggtgaccaacaccgggccgtccctgcagactctaggc
tccgccttcctcaacatcatgtggcctcacgagctgtccaatgggaagtggctcctgtac
cccactgctctccacttccatggccatccagaaacaccctgtaccccccacacctccctc
aacccacgcaagttctcccacagttctccttctgacgaccagccacaggcagcaggcctg
aaggccaggaggaaggggcgttccaacccagaagaggagggccatgtgatgaccaagggc
agtctgggaaggactacgcctgctgtggctgcctcagagagacgcaagtcactcaaactg
gactgtctgctgggttcagcgcgctgtgtgctgttccagtgtcctctccacagcttctct
gactcggctgtcctcaagatccagggacgcctttggaacagcacctttctggaggagttc
ccatcagtcagtgctctggagctgctggttagagccaacatcacagtcaagtccagcatc
aaacacctggtgctgagggatgctgctgcacaggtcccagtgatgatttacccagaggtt
ggtctgactgcccagtactgggtcccctggtggtggattctcatagccatcctggctggt
atcctggtgctgtctctgctggtctgcatcctctggaagtgtggtttcttccgtcgggtc
cagtatgaagacaaagttcctcagtaccatgcagtgaagatcccccgtcaagaccggccc
cagttccagcagaaggcagggatcctccagaagaaggagtgggccacacactggagtgac
ggaagctcctga
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integrated database retrieval system
