Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413903
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Entry
139413903 CDS
T10872
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139413903
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
139413903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
139413903
NCBI-ProteinID:
XP_071017851
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Position
7:complement(79966047..80103363)
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AA seq
490 aa
AA seq
DB search
MRLLVSQSHINMNCEQDFGEGGMNVTLTLRLLMHGKEVGSIIGKKGETVKKIREESSARI
NISEGSCPERIITITGPTDCVFRAFTMITLKLEEDLTTLVANGTVTSKPPVTLRLVIPAS
QCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTERGVTISGTQDAIIQCVKLICTVIL
ESPPKGATVPYRPSPSPGTVMISGNQVFEASEYGSHPLFQLAQGGLDLQQTYAVQNQYGI
PHSELAKLHQLSMQQQGLAAQMNQQQTNSVIPGFSYLSYLPSGMDSNSQTTSQELLIPND
LIGSIIGRQGTKINEIRQVSGAQIKIGSQLDSTSDRAVTITGTPISINLAQYLITSCLET
AKSTAQSSSMSNPADLTMAYSQPPSPAQSSAVAAATLAAMGCPGMSHPPPHAAVPMMGTH
PYGALPLSSLLGMQSMKSIQSVPFLALSNPAANAAAAAGAHAQAQISYTAKISSANGIGK
KPERQKFAPY
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccttgtgtctcagtctcacatcaacatgaactgtgaacaggactttggagag
gggggcatgaacgtcacccttacgctacggctcctcatgcacggaaaggaagttggcagc
atcatcggaaagaaaggagagacggtgaagaaaatacgagaagagagcagcgcccgtatc
aacatctcagagggctcgtgtccagagaggatcatcactattacaggacctacagactgt
gtcttcagagccttcactatgatcactctcaaactggaagaggacctcacaactctggta
gccaatggcacggtcaccagcaagccccccgtcaccctacgtttggtcattcctgccagc
caatgcggttctctcatcgggaagggcggctccaagatcaaggagatcagagagaccacg
ggggcacaagtacaggtagcgggagacctccttcccaactccactgagagaggtgtgacg
atatccgggacccaagacgccatcatccaatgtgtcaagctcatctgcactgtcattctc
gagtcccctccgaagggggccactgttccatatcgaccaagcccctccccaggaacagtc
atgatctccgggaaccaggtgttcgaggcgtctgagtacgggtcacaccccctcttccaa
ttggcccagggaggactggatctacaacaaacgtacgctgtacagaaccaatatggcatt
ccacattcagagttggccaagcttcaccagttgtctatgcagcagcaaggcctggccgcc
cagatgaaccaacagcagaccaactctgtcatacctgggtttagttacctctcttatctc
ccatcaggaatggactccaattcacagaccacatcacaggagctactcattccaaatgat
ctcatcggctccatcatcgggcgtcagggcaccaagatcaatgagatccgccaggtgtca
ggggctcagataaagatcggtagccagctggacagcaccagtgatagagccgtcaccatc
acagggacacccatctctatcaacctggcccaatacctcatcacctcctgtttagagacc
gccaaatccaccgcccagtcttcctccatgtcgaaccctgctgacctcaccatggcctac
agccaaccgccctcaccagcccagtcttcagctgtggctgctgccaccctggctgccatg
ggctgccctggcatgtcccacccccccccccacgctgcagtccccatgatgggcacccac
ccctatggggccctccccctctccagcctccttggaatgcaatccatgaaatccatccaa
tctgtacccttcctggctttatccaaccctgccgccaatgcagccgccgccgctggggcc
catgcccaggcccagatctcctacacagcgaagatctcctcggccaatgggatcgggaag
aaaccggagagacagaagtttgcgccatactga
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