Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413904
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Entry
139413904 CDS
T10872
Name
(RefSeq) dystroglycan 1
KO
K06265
dystroglycan 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03273
Virion - Lassa virus and SFTS virus
ocla04512
ECM-receptor interaction
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139413904
03268 Virion - Orthopoxvirus
139413904
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139413904
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139413904
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Gene cluster
GFIT
Motif
Pfam:
DAG1
a_DG1_N2
He_PIG
DUF4064
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
139413904
NCBI-ProteinID:
XP_071017853
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Position
7:80633350..80699130
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AA seq
879 aa
AA seq
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MCNKQRGECRPAEEAGAGMLGLGRRTSVVLLLALLVAMVQGQVEVMGDMLQDEPGKLEAS
MHSSILSDFQEVEALEPVAATVYQAEVGAAGGESGIPDSSAVVGRVFQMKVPLKTDHTSN
TKITESGKETLPAWLHWDWENNVLQGLPLEEDKGVHYIAVSTSNGGQDIFSIEVHPEEHV
DPIQLAILSASNNEVKPFVCGTEEPVTVLTVILDADLTKMSSRQRVELLGKMKKFSGVEL
QHMKILPVVNNRLFDMTAFMAGPGNAKKVVENGALLSWKLGCSLDQSNVPNISSVQAPAK
EGTMSAQLGYPVVGWHIANKKPHIPKRVRRQLNNTPTPVLVVLPPTSVVEPPIRIVPTLS
SPAIAAPTDSSAPPMRGPVPLPMKPTIRVRDSYAHTPTQGAPLPTRVMESTSTISIEPTM
TRHTVVEATPTLPPPTTVATRKPTKKPKRPKTTPMPRESKTTTAKPARRTTPSSIVPDPR
NEKPDLRNPIDQVNAFVGTYFEVKIPSDTFFDKEDGTTDKLRLTLRMNHNEVVGDDSWIQ
FNSTSQLLYGLPDSNHVGKHEYFMQATDKGGLNAIDAFEVRVNRWASNDKSPVLFQARLH
GEPRLVTNDIHKKILLIKKLAYSFGDRNSSTVTLRNITKGSIVVEWTNNSLQQNPCPKEQ
IQTMSRRISDAQGRPSQTFISAMEPDFIPISIKVKGTGACRNYMFVPPGEITIPIPPAVT
PALGTGRQSTDDVYLHTVIPAVVVAAILLIAGIIAMICYRKKRKGKLTIEDQATFIKKGV
PIIFADELDDSKPPPSSSMPLILQEEKPPLPPPEYPNMASPETTPLNQDLLGEYTALRDE
DPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaataaacagagaggagaatgtcgaccggcggaggaggctggagcggggatgctt
ggtctggggaggagaaccagtgtggtactactactggctctcctggtagccatggtccag
ggacaggtggaggtaatgggggacatgctgcaggatgaacccgggaagctggaggcctcc
atgcactcctccatactgtcagacttccaggaggtggaggccttggagccggtggcggct
acagtctatcaggctgaagtaggagcagcagggggggagtcaggaatccccgactcgtct
gctgtggtgggccgggtgtttcagatgaaggtcccgttgaagacggaccacaccagcaac
actaagataactgagtcaggcaaggagacgctaccagcatggctacactgggactgggag
aacaacgtcctacagggtctaccactggaggaggacaagggtgtccactacatcgccgtc
tcgacatcaaacggcggccaggacatcttctccatcgaggtgcacccagaggaacatgtg
gacccgatccagctagccattctgtcagcatccaacaatgaggtcaagccatttgtctgc
ggcacagaggaaccggtgacggtactcacggtgattctggacgccgacctcaccaagatg
agctccaggcagagggtggagctgctgggcaagatgaagaagttctctggcgtggagctc
cagcacatgaagatacttcccgtggtcaacaacagattgtttgacatgaccgccttcatg
gccggaccgggaaatgccaaaaaggtggtggagaacggagctctgttatcctggaagctg
ggctgttccctggaccagagcaatgtccccaacatcagcagcgtccaggccccagcgaaa
gaaggcactatgtctgctcagctgggataccctgtggtcggttggcacatcgccaacaag
aagcctcatatccccaaacgggtgaggcgccagctcaacaatacccctaccccggttctt
gttgtgcttcccccaacgtctgttgtcgagccccctattcgcattgtacccaccctgtcg
tcacctgccattgctgcccccacagacagctctgccccacccatgagaggacctgtgccc
ttgcccatgaagcccacgatccgtgtcagagactcatatgcccacactcccactcagggt
gcacccctgccaaccagagtgatggagtccactagtaccatctccattgaacccactatg
accaggcataccgttgtggaagctacaccgacactccctccacccaccacagttgccacc
agaaagccaaccaagaaaccaaagagaccgaagaccactccgatgccaagggagtccaag
accaccacagccaaaccagccaggcgcaccaccccttcgtccatcgtgcctgacccaaga
aacgagaaaccagatctccgcaaccccatcgatcaggtcaatgccttcgtgggcacatac
tttgaagtgaagatcccatccgatacgttctttgacaaggaggacggtacaacagacaaa
ctaaggttgaccttgaggatgaaccacaacgaagttgtcggggatgactcctggatacag
tttaatagcacaagccagctgctatacggtcttccagactcaaatcacgttgggaagcat
gagtacttcatgcaggccaccgataagggtggtctgaacgcgatcgacgccttcgaggtc
cgtgtgaaccgctgggcatccaacgataagtccccggtcctgttccaggcccgcttacac
ggagaacctcgcctggtgaccaatgacatccacaagaagattctgcttatcaagaagctg
gcgtactcgttcggtgaccgcaacagcagcacggtcaccctgaggaatatcaccaaggga
tccatcgtggtggagtggaccaacaacagcctccagcagaacccttgtcccaaggagcag
attcagaccatgtccaggaggatctctgatgcccagggaaggccctcccagaccttcatc
tccgccatggaaccggacttcatacccatcagcatcaaggtcaaaggaacgggtgcctgc
cggaactacatgtttgtcccgcctggtgaaatcactatccctatccccccagctgtcacg
ccggcactgggcaccggacgccagagcacagacgacgtctacctccacacggtgattccg
gccgtggtggtggcggccatcttgctgatcgctggcatcatcgccatgatctgctaccgc
aagaagcgcaagggcaagctgaccatcgaggatcaggctaccttcatcaagaagggggtg
cccataatcttcgcagacgagcttgacgattccaagccgcccccgtcctcctccatgccg
ctcatcctgcaggaggagaaaccccctcttcccccaccggagtaccctaacatggccagt
ccagagaccacccccctgaaccaggaccttctgggtgagtacacggctctgagggacgag
gaccccaacgcgcccccctaccagcccccgccccccttcaccgcacccatggaaggtaaa
ggatctcgtccaaagaacatgaccccttacagatccccaccaccttacgtgccaccctaa
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