Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413957
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Entry
139413957 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-2-like
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139413957
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139413957
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139413957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_9
zf-C3HC4
zf-RING_2
zf-RING_UBOX
APOBEC1
MKRN1_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139413957
NCBI-ProteinID:
XP_071017951
LinkDB
All DBs
Position
7:complement(88097405..88119588)
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AA seq
437 aa
AA seq
DB search
MNTKQVTCRYFLHGVCREGNRCMFSHDLTTSKPSTICKFYQRGVCAYGDRCRYDHIKPAG
GGGGGGRGVPMDLPNRNPITAGAFIPPGVAVPGHPGNSAPPPRHNGGKKPLVLRDRAQGC
DSRMMPYGGDGPEVTEAECWAEYHENGAHAKPHSYLDAIRTSLECSATASPYPLPVSVPC
PQQQLCPSAAAGQCHYGNTCPYLHGDLCDICRLQVLHPHDPEQRRAHEKMCMLVFEADME
KAFAAQHSQDKVCSICMEVVYEKAAASERRFGILSSCCHTYCLSCIRQWRCAKQFENKII
KSCPECRVVSEFVIPSVYWVEDQDEKNRLIEDFKSGVSKKPCKYFDQGRGTCPFGGKCFY
MHAYPDGTRAEPDKPRKQLGSEGNVRFLNSVRLWDFIEDREQRSVAQPQDEVSELRELFM
QMSGPGREESSGVSAQP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgaagcaagtcacctgcaggtattttctccatggagtctgccgagaggggaat
aggtgcatgttctctcatgatttgaccaccagtaaaccttcaaccatctgtaagttctac
cagagaggtgtgtgtgcctacggagaccgctgcaggtatgaccacatcaagccggctggt
ggtggtggtggaggggggagaggtgtgcccatggacctccctaacagaaaccccatcact
gctggggccttcattccccctggtgttgctgtcccgggacatccaggcaactctgcaccc
ccacccaggcacaatggagggaagaaacccctggtgctgagagatagagcccagggctgt
gacagcagaatgatgccttatggtggagatggcccagaggtaaccgaggcggagtgttgg
gcggaataccatgaaaacggcgcccatgccaaacctcattcctacctggacgccatcagg
accagtctggagtgttctgccacggccagcccctacccactccctgtctctgtcccctgc
ccccagcaacagctctgtccctctgctgctgcaggacagtgtcactacggaaacacctgt
ccctatctccatggtgacctgtgtgacatttgcaggctgcaggtgctccacccacacgac
cctgagcagaggagagctcacgagaagatgtgtatgttggtgtttgaggcggacatggag
aaggcgtttgcagcgcagcacagccaggacaaggtgtgttctatctgtatggaggtggtt
tatgagaaagctgctgcctcagagagacgcttcgggatcctctcttcctgctgccacaca
tactgcctctcctgcatccgccagtggcgctgcgccaagcagtttgagaacaagatcatc
aagtcgtgtccagagtgcagagtggtgtctgagtttgtcatccccagtgtgtactgggtg
gaggaccaggatgagaagaacagactgatagaggacttcaagtctggagtcagtaagaag
ccgtgtaaatactttgaccagggccggggaacctgtccgtttggagggaagtgtttctac
atgcatgcttaccctgacggaacgcgggccgagccggacaaaccccgcaagcagctgggc
tctgaggggaacgtgaggttcctgaactctgtgcgtctgtgggacttcattgaggatcgt
gagcagcgcagcgttgcccagccgcaagacgaggtcagcgaacttagagaactcttcatg
cagatgtctggtccaggaagggaggagagcagcggggtgtctgcccagccctga
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