Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414043
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Entry
139414043 CDS
T10872
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
Membrane trafficking [BR:
ocla04131
]
SNARE
SNARE associated proteins
Others
139414043
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
139414043
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
139414043
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
139414043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139414043
NCBI-ProteinID:
XP_071018021
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All DBs
Position
7:complement(5759120..5765797)
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AA seq
432 aa
AA seq
DB search
MADAGNKESIGGDEFTNTELENNKNNTMVEEGSTLLRRMEISVAEAEKRTGKNTVNMQEI
FTVYLIETRPIDAITEGHNPAPDSLWRRYSEFEILRNYLLVTYPFIVVPPLPEKRAEFVW
HKLSADNMDPDFVERRRVGLENFLLRVASHSVLSNDKILYHFLTEEHRWKEVVYETGFQA
KADSRIKALSATFRVKNPDKRFTEMKHYSDELQSLTSQLLRVRARVADRLYGVYKVHGNY
GRVFSEWSALEKEMGDGLQSAGHHMDAYAASVDDMLEEEEHYADQLKEYLFYAEALRAVC
RKHELTQYELETASSDLISKKQQREELATGMVRTFSFKGMTNKLFGQETPEQREAKLSLL
EEQIVQGEETVTEKTVECEEYVKGAWVDMQRFKEQKDRDLREALIGYAVMQISMCKKGIQ
VWTNAKECFHKM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctggaaataaagagtcgattggaggagatgaatttaccaacacagagttg
gagaataacaagaataacacgatggtggaggaaggatccactctgctgcggagaatggag
atcagtgtggccgaggcagagaaaagaactgggaaaaatacagtgaacatgcaagagata
ttcacagtgtacctcatagaaactcgacccatagatgcaataacagaaggccataaccca
gccccagactctctctggaggagatacagtgaatttgagatcctccggaactatttgtta
gtcacctatccatttatcgtggtgccgcctttgccagagaagagggcagagtttgtttgg
cacaagctgtctgcagacaacatggacccagactttgtagagaggcgcagggttggtctg
gagaactttctacttcgcgtggcctcccattcggttctgtccaatgacaaaatcctatac
cacttcctgactgaggaacacaggtggaaggaggtggtgtatgagacagggttccaagcc
aaggcagactccaggattaaagctctgagcgcaactttcagggtgaagaaccctgacaag
cggttcacagagatgaaacactacagcgatgagcttcagtctctcacctcccagctgctc
agagtcagagcaagagtagcagacaggctctacggcgtatacaaagtccatgggaactac
ggaagagtattcagtgagtggagtgcgttagagaaggagatgggagacggactacagagt
gctggacaccatatggatgcctatgctgcctcagtagatgatatgttggaggaagaggag
cactacgcagaccaactgaaggaataccttttctatgctgaagccttaagggctgtgtgt
aggaaacacgagctgacccagtatgagctggagacggcctcctcagacctcatctccaag
aagcagcaacgggaggagctggccactgggatggtacggacattctccttcaaaggaatg
accaacaagctgtttggtcaggagacaccagagcagagggaggctaaactcagcctacta
gaggagcagatcgtccagggagaggagacggtcacagagaaaacagtggagtgcgaggag
tacgtgaagggtgcgtgggtggacatgcagcgcttcaaggagcagaaggacagggatctg
agggaggctctgattggctacgccgtcatgcagatcagcatgtgtaagaagggcattcaa
gtgtggaccaatgctaaggaatgtttccacaagatgtaa
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