Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414142
Help
Entry
139414142 CDS
T10872
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139414142
04517 IgSF CAM signaling
139414142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_LRWD1
LRR_14
LapA_dom
Motif
Other DBs
NCBI-GeneID:
139414142
NCBI-ProteinID:
XP_071018124
LinkDB
All DBs
Position
7:18806320..18818242
Genome browser
AA seq
830 aa
AA seq
DB search
MLPRILFLCSFFAAACFQDIQPSKVFLSESCDSLCTCEEKDGILYLNCEERNISKISQIK
VPSALPFHLNLYKNDLVELNAEDLEGLKNAVSLHLGANSIQELEPGVFSALGSLKKLHIN
SNFLVTLKEDTFHGLVNLEFLQADTNFIRVVEPGAFSKLIRLKVLILNDNAIEFLPSNIF
RFVPLTHLDLRGNQLQTLPYVGFLEHIGRIMELLLEDNDWMCDCEILHLKIWMENMRAQS
AIGEVVCSSPHHLRGTILAKIKRDVLCPSHADINLEEPSKSLDMVVTPSSKVAEIPKLED
VVKIPTPYVPGSPCVEHCSCHNHPVAGFLMHCQDRGIQRISDIGILEQSPTKLVLTGNMI
QRLLKYDFVTYDSLELLNLANNRIDYIDNETFLSLSNLKKLYLNGNRIETLSATMFIGLH
NLEYLYLEYNIIKEIVPGAFNPLPNLKLLSLNNNLLTSLPLQIFRNVPLTKLNLRKNLLM
HLPVSNVLDQLDSLEQVYLEDNPWDCSCDLISLKQWVEKLRKDTVVGSILCHTPRKVAKA
ELRALRNELLCRGLVTYSLPTDEDETTTVATDGSRSGFFSSITDSVPLSVLILSLLVIFL
MVIFCSAGIVAFLVHRRRRRVKKKQAEEQPRESSSPIHLQYSMYGQKTTHHTLGQRTGGT
VYDERSHSPIVQICRNPTYCTQHKEYESDLNELDEPKHICRSIMETENTSPLTGSNLKFR
AVTSDCPTEFVTLGDASSLYKNILERERVRELQQLGITEYLRKNMSQLQPTVEMQVPGHH
EELKLMETIMLSRPRKVMVEQTKNEYFELKANLHTEPDYLEVLEHQTAYN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgctaccccgcatccttttcctttgctcatttttcgctgctgcttgtttccaagacatc
cagccctccaaggtatttctgagtgaatcctgtgactcattgtgtacttgtgaagaaaaa
gatggcatcctgtatcttaactgtgaggagagaaatatcagcaagatctcccaaatcaaa
gtgccgtcagctctacctttccacctcaatctgtacaaaaacgacttggtggagttgaat
gcagaagacttggaaggtttaaagaatgccgtttcacttcatctcggggctaatagcata
caagagcttgaacctggggtctttagtgcactgggctccttgaagaagctccacatcaac
agtaatttcctggtcacgttgaaggaagacacttttcacggcttggtaaatttggagttt
ctccaggcggacacaaacttcatccgcgtggtcgagccgggggcattcagcaaactcatc
cgcctcaaagttctgatcctcaacgacaacgccatcgagtttcttcccagcaatattttc
cggtttgttccgctcacccacttggacctgcgggggaaccagttacagaccctgccttac
gttggcttcctggagcacattgggcggatcatggagcttcttctggaggacaacgactgg
atgtgcgattgtgagatccttcacctgaagatctggatggagaacatgcgggcccagtcg
gccattggggaggtggtctgcagcagcccccaccacctcaggggcaccatcctggccaaa
atcaaacgggatgttctctgcccctctcacgctgatatcaacttagaggagccttccaag
tcactggacatggtggtcaccccgtcttccaaagtggcagagattccgaagttagaggat
gtcgtaaagattccgacaccttatgttccagggagtccttgtgtggagcactgttcttgt
cacaatcaccctgtggctgggtttttaatgcattgtcaggatagagggattcaacggatt
tcagatattggaatacttgagcaaagccctaccaagctggtgctcacaggaaacatgatt
cagagactgttgaaatatgactttgtcacatatgacagtttagagttattgaatttagcc
aacaatcgaattgattacattgacaatgaaacttttctcagcttaagcaatttgaaaaaa
ctttatctcaacggcaacagaattgaaaccctttccgcgactatgttcattggactccac
aaccttgaatacctatatttggaatataacattatcaaagaaattgttccaggagctttt
aatcctttgccaaatctcaaactcttgtctttgaataacaatctgctgactagtctccca
ttgcagatatttcgcaacgtacccctcaccaaactgaacctgagaaaaaatctgctcatg
cacctgcctgtaagcaacgtgctggaccagcttgactctttagagcaggtttatttagag
gacaacccctgggactgcagctgtgacttaatcagtctcaaacagtgggttgagaagctg
aggaaggacacagtcgtaggttccattttgtgtcacacaccgagaaaagtggcgaaggct
gagctgagggcccttagaaacgagttgctgtgccgcggcctagtgacctactccttgccc
acggatgaggacgagacaaccacagtggcgactgacggctctaggagcggtttcttcagc
tcaatcacggactcagttccgctctccgttctgatccttagcttgctcgtcatcttcctc
atggtcatcttctgttcagcggggattgtggcattcctcgtgcacagacggcgaaggagg
gtgaagaagaaacaggcggaggagcagccgcgggagagcagcagccccatccacctgcaa
tacagtatgtacggccagaaaaccacccaccacacactggggcagaggaccggaggcacc
gtgtacgacgagcgctcacacagccccatcgtccagatctgccgcaaccccacctactgt
actcagcataaagaatatgagtccgacctcaatgaactggacgaaccaaagcacatctgt
cgtagcatcatggagacagagaatacttcccctctcacaggctctaatttgaagttcaga
gctgtgacgtcagactgcccaactgagttcgtaacactcggcgacgcgagctccctctat
aaaaacatactagagagggagagggttagggagctgcagcagctcggaattactgaatac
ctcaggaaaaacatgtcccagctacaaccaacagtagagatgcaggttccaggacaccac
gaggaactgaaattaatggagactattatgttgtcgagaccgaggaaggtcatggtggaa
caaactaaaaacgagtactttgaactgaaagctaacctacacaccgagccagattatttg
gaggttctggagcatcaaactgcatataactga
DBGET
integrated database retrieval system
