Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414194
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Entry
139414194 CDS
T10872
Name
(RefSeq) growth/differentiation factor 5-like
KO
K04664
growth differentiation factor 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139414194
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139414194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139414194
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139414194
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
139414194
NCBI-ProteinID:
XP_071018182
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Position
7:complement(33120263..33123070)
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AA seq
538 aa
AA seq
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MKVLKSVPLLLGCWTLLYLDFIPASLSHTGIAECAPESGGKEHTGGAGEGANPGIGSTAR
STVGNYGAGGWNSLSAARITRIRTGPPLIKGEAAKAKAVTSVSSPHSVTVSRARGAVNLG
PEEAVRYWVPGGDATKAAAAPAPVALSMQTGKGSGRTGQSKGNTVPRAATPARTGQQKVV
DVQKHIVRLAQMSVKATGKLNGRYSPKLLLVTPHDYMLSLYWSLSTGGVNTSVLHEAGMA
NTITSFVDKGQDARIPQLRRQKYYFNISSLEKEGLLGAELRILRKRLADPHKALSTDRVF
CLKLFTCVAGKQKATLLQTQTIKDHNSPKWEVFDIWKLFKNFKNTVQLCFELEGLERGRP
VDLRALGFSRLGRPTKEKAFFLMFGRTKKNDLFYNEIKARSGHDNKTVYEYLFTQRRMRR
APTNRGKKLAKNPKPRCHRKQLHVNFKEMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEP
TNHAIIQTLMNSMDPDSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtacttaaaagtgttcctcttttattggggtgttggactctcttatacctggac
tttatcccagcgtcactgagccataccggcattgcagagtgcgcacccgagagcggagga
aaggagcacacaggcggggcaggtgaaggagccaacccgggaattggctcaactgccagg
tcaacggtaggaaactacggcgcagggggttggaattctctaagtgctgcgaggatcacg
cgcattagaacaggacccccgctgataaagggcgaggcagccaaagcgaaagctgtgaca
tcagtgtcatcaccgcacagcgtaacggtcagccgtgctcgtggagctgtcaatttgggg
cccgaggaggctgtgcgctattgggtacccggcggggatgctactaaagcagcagctgcg
cctgctcccgtggcgttgagtatgcaaacaggcaaaggctcaggcaggactggacagagc
aaaggaaacactgtccccagagctgcaacaccagcacgaactggacagcaaaaggtcgtt
gatgtgcaaaagcacatcgttcggttggcccaaatgagtgtcaaagcaacgggcaaactt
aacggcagatactctccaaagcttctattggtaactccgcatgactacatgttgtcactc
tattggtcactatccacgggaggggtgaacactagtgtgctgcacgaggctggcatggcc
aacaccatcacaagctttgtggataaaggacaagatgcccgtattccccagttgagaaga
cagaagtattacttcaacatcagttccctggagaaggaggggttactgggtgctgagctg
cgtatactcaggaaaagactggctgatccacacaaagcactttccactgacagagttttc
tgcctgaagcttttcacttgtgtagcaggtaagcagaaagctacactgctccaaactcaa
accatcaaggaccacaattcacccaaatgggaagtgtttgacatttggaaactattcaag
aatttcaagaacaccgtccagctttgctttgagctggagggtttagaacggggacgcccc
gtggacctcagggcactgggcttcagtcgtctgggcaggccaaccaaagagaaggccttt
ttcctcatgttcgggcgcaccaagaaaaatgacttgttctacaacgagatcaaagctcgg
tctggccacgacaacaagactgtgtacgaatacctgttcactcagcggcgcatgcgccga
gctccaaccaaccgcggcaagaagctggccaagaaccccaagcctcgttgccacaggaag
cagctgcacgtcaacttcaaggagatgggctgggacgattggatcatcgccccactagag
tatgaggcctaccactgcgacggggtatgtgacttccctattcgctcgcacctcgagccc
accaaccacgccatcatccagacgctcatgaactccatggaccccgactcgactccgccc
acctgctgcgtgcccactcgcctcagcccaatcagcatcctctacattgactcggccaat
aacgtggtctacaaacagtatgaggacatggtggtggagtcctgtggctgcaggtag
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