Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414228
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Entry
139414228 CDS
T10872
Name
(RefSeq) A-type voltage-gated potassium channel KCND3-like
KO
K04893
potassium voltage-gated channel Shal-related subfamily D member 3
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139414228
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
139414228
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GFIT
Motif
Pfam:
Ion_trans
DUF3399
BTB_2
Ion_trans_2
Shal-type
BTB_3
HpsJ
PINE1_C
DUF2534
PKD_channel
Motif
Other DBs
NCBI-GeneID:
139414228
NCBI-ProteinID:
XP_071018225
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Position
7:39247816..39363388
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AA seq
661 aa
AA seq
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MAAGVAAWLPFARAAAIGWMPVANCPMPIAPRDHRKRHDELIILNVSGRRFQTWRTTLDR
YPDTLLGSSEKQFFYDEETKEYFFDRDPDSFRSILNFYRTGKLHYPRYECISAYDEELTF
FGIIPEIIGDCCYEEYKDRKRENAERLQDDQDDNKDCKLPNMTYRETMWRAFENPHTSTM
ALVFYYVTGFFIAISVLTNVIETVPCGATPSQKDMPCGERYTIAFFCMDTACVLIFTVEY
LMRLFAAPSRYQFMRSVMSIIDVVAIFPYYIGLVMTDNEDVSGAFVTLRVFRVFRIFKFS
RHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSSTKFTSIPASFWYT
IVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRA
QKVQKARLARIRIAQTGSSCTGFLQSKRNDLLNELLELTQQPYKQNNIHEGSEEEEQQLN
KGMSLLESQHHHLLHCLEKTTAHEFVDEQLYEQNCLETTIQSYTSHSPSFSSQDGPIGTC
CTRRGKMNSPLPNSSLPLQPSHQQGSLQELSALHIQCGDKLPHTTSRSSLNMKTDDVGLI
NCKGSQITTAIISIPTAPSDTTDGGGLHGPPQRRPPPPPTGPQAPSINTTASSNVIKVSA
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggagtggctgcatggcttccctttgcacgggcagcagctattggctggatg
cctgtggccaactgccccatgcccattgctcctagagaccacagaaagagacatgacgag
ctgatcatcctgaacgtgagtggacgacgcttccagacctggaggaccacactggaccgc
tacccagacaccctgctgggaagctcagagaaacagtttttttacgatgaggagacaaag
gagtatttcttcgaccgggacccagactccttccgcagcattctcaacttctaccggacg
ggaaagttgcactatcctcgctacgagtgcatttcggcctatgacgaagagctaactttc
ttcggcatcattccggagatcatcggcgactgctgctacgaagagtacaaggaccggaag
cgggagaacgcggagcgtctccaggatgaccaggatgacaacaaggactgcaagctgccc
aacatgacatacagagagaccatgtggagggcctttgagaaccctcacacctccaccatg
gcccttgtgttctactatgtcaccgggttcttcatcgccatctcagtcctcaccaacgtg
atagagacggtaccttgcggtgccacgccttcacagaaggatatgccgtgtggcgagcgc
tataccatcgccttcttctgcatggacacagcctgcgtcctcatcttcaccgtggagtac
ctcatgagactgttcgccgcgcccagccgctaccaatttatgcgcagtgtgatgagcata
atagacgtggtagccatcttcccctactacatcggcctggtgatgacagacaatgaggat
gtgagcggggccttcgtcacgctcagagtgttccgtgtgttccgcatcttcaagttctcc
cgccactcgcagggcctcaggatcctggggtacacgctgaagagctgcgcctccgagctg
ggcttcctcctcttctccctcaccatggccatcatcatctttgccacggtcatgttctac
gcagagaaggggtcgtcgtcgaccaagttcaccagcattccagcctccttctggtacacc
attgtcacaatgaccacgttgggttacggggacatggtgcccaagacgatcgcggggaag
atctttggttctatctgttctctgagcggggtgctggtaatcgccctgcctgttcccgtc
atcgtgtccaactttagccgaatctatcaccagaaccagagagctgacaaacggcgtgcg
cagaaggtacagaaagccagactggcccggataagaatagcccagacgggcagctcctgc
acgggcttcctccagagcaaacgcaacgacctcctcaacgaactgctggagctcacgcaa
caaccttacaagcaaaacaatatccacgagggatcagaggaagaggaacagcagctcaac
aagggcatgtcgttattagagagccaacaccaccacctattgcactgtctggagaagacc
actgcccatgagtttgtggatgagcagctgtatgagcagaactgcctggagaccacgatc
cagagctacacctcccacagcccctccttctccagccaggacgggcccataggcacctgc
tgtacccgccgggggaagatgaactccccactacccaactccagcctgcccctccagccc
agccatcagcagggctcactacaggagctcagcgccctgcacatccagtgtggggataag
ctgccccataccaccagtcgctccagtctcaacatgaagacagacgatgtgggcctgatc
aactgcaaggggagtcagatcaccacggcgatcatcagcatccccacggccccctccgac
accactgatgggggcggtctccacggacccccccagcgcagaccccccccaccccccacc
ggcccacaggcccccagcatcaataccaccgccagctccaatgtcatcaaagtatctgct
ctgtga
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