Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414255
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Entry
139414255 CDS
T10872
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139414255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139414255
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139414255
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
UFL1_C
DSHCT
Motif
Other DBs
NCBI-GeneID:
139414255
NCBI-ProteinID:
XP_071018257
LinkDB
All DBs
Position
7:42254962..42255630
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AA seq
182 aa
AA seq
DB search
MKPIEIRFSLHRPLQHRDPAMVPTITSTMIYPKEHLTLTNKLRKPVVEKLRRDRINNSIE
QLKSLLVPEILNQQSDSKLDKADILEMTVCFLRRQQQNQPVSSSSCSPPVNQGYSRCVHE
IVHFLSKDEQKSQSQRRLLRHFQSLQPSSDKNRIDGPQLSSPAQHSISKDKSPVNIAPWR
PW
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatagagatcagattctctctacacagacctctacagcacagagatccagcc
atggtacctacaatcacttcaactatgatctaccctaaggagcacctgactctgacaaac
aagctaagaaagccagtggtggagaagttacgcagagatcgtatcaacaacagcattgag
cagctcaagtctctcctggttccagagatcctcaaccagcagtccgactctaagctggac
aaagccgacatcctggagatgacagtttgcttcctgagacgacagcaacagaaccagcca
gtgagctcctcctcctgctcaccacctgtcaatcagggttactccaggtgtgtccatgag
attgttcacttcctgtctaaagatgagcagaagtcacagtcccagagaagactgctgcga
cacttccagagcctgcagccatcctctgataagaacaggattgacggtcctcagctgagc
tccccagcccagcacagcatcagcaaagacaagagtccagtcaacatcgccccctggagg
ccatggtag
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integrated database retrieval system
