Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414268
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Entry
139414268 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04217
Necroptosis
ocla04622
RIG-I-like receptor signaling pathway
ocla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
139414268
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139414268
04625 C-type lectin receptor signaling pathway
139414268
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139414268
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139414268
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139414268
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C67
139414268
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139414268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
zf-HIT
Motif
Other DBs
NCBI-GeneID:
139414268
NCBI-ProteinID:
XP_071018270
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All DBs
Position
7:complement(45299519..45307805)
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AA seq
707 aa
AA seq
DB search
MEFKGDGKEKFFIVTRGKVRKGFSRGCIGRVEAVMHKGELMGLLYGGGSSGNPKSGDMVK
REDTYPLTRHQAQLLLFVSPSSKRLELLCNPQLFSAICVLSQDDLVVVKHKKGHQPGLVR
NLMLIGKKENQGDLLMLGFEVEFVDSDQTVSPKKPAPLPLFSAADIVQVVPAYSVGIGPR
WKDSYSEGLNRKAVSPINSMPNMGSRGQQVRDINHLDQNVTQTPTQSPSHHPFEVGSMVE
VTSNTGITVYGVIRWMGVLSENKNDWAGIELDYEVNNCSDGTYGGQQYFTCKGGRALFVP
LTKCSPDGRFLCPPSEKETLKATDIPPVIPLEETDENVPPIPESEALSLLVGKMKGIQGH
YNSCYLDATLFSLFCSSMTLDSVCHKPDGTEKSISRSLKKDIVNRLRRQGFVPAESVMNF
RKQLGCDTFVTEEKDPEEFITILLQRVLCMKSLLKLRSNNGTSQDAYTFQIILDKEQVTQ
TPTVQQLLDISLLSCGLKFEEIPSCLMVHMPRFGKKYKMFPYIIPSTEFDITDLLYNSPR
ECFLCGRLAKYECPQCLQDRKLQPGRIKQYCTTCKTQVHIHPSRQSHCPKALAVPAEVPA
DAPVPRHKMQLFAVLCIHTSHYVSFVKYGPGPRSWLFFDSMADRCGDDQSGYNIPEIRAC
PEVGDFLSQSEEELARADPSQAGEPVRRLLSDSYMCLYQSASMALYR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaaggagatgggaaggaaaagttcttcatagtgacacgggggaaggtgaga
aaaggcttctccagaggatgtatcggccgtgtggaagcagtgatgcataagggagagctg
atgggactgttgtacggaggtggcagcagtgggaatcctaagagcggggacatggtgaag
agggaggacacgtaccccctcacccgacaccaggcccagctgctgctcttcgtgtccccc
tccagcaaacgcctggagctcctgtgtaacccccagctcttttcagccatctgtgtactg
tctcaggatgacttggtagtggttaagcacaagaaaggtcaccagccaggcctggttcgg
aacttgatgctgatcggtaagaaggagaaccaaggggacctgctgatgctgggctttgag
gttgagtttgtggactctgatcaaacagtgtcccctaagaagccagctcctctccccctg
ttcagtgcagcagacattgtccaggttgtcccagcatactctgtaggcattggccctcgc
tggaaagacagttattcagagggtctaaacagaaaggcggtgtcacctatcaactccatg
cctaatatgggatctcgtggacaacaagtgagagatataaaccatttagaccagaatgtc
acccaaaccccaacccaaagcccgtcacaccacccttttgaggtgggatccatggtggag
gtaacatccaacactgggataactgtatacggggtgatccgttggatgggcgtcctttca
gaaaataaaaatgactgggccggaattgagctggattatgaggtgaataattgctcagat
gggacgtatggaggccagcagtatttcacttgtaaagggggcagggccttgtttgtgccc
ctcacaaagtgcagtccagatggaaggttcttatgtcccccctctgaaaaggagaccctc
aaagcaacagatatccccccagtcattccattggaggaaacagatgagaacgtccctcct
atccctgagtcggaagccctgtctttgcttgtgggcaagatgaaggggatccaggggcac
tataactcctgctacctcgacgccactctcttcagtctgttctgctcatctatgaccctg
gacagtgtttgccacaaaccagatggcacagaaaagagcatatcacgctctctgaagaaa
gacattgtcaaccgtttgcgcagacaaggttttgtgcctgctgagagcgtaatgaacttc
cgcaagcagctcgggtgtgacacctttgtaacagaagagaaagaccctgaagagttcatc
acaatccttctacagcgggtgctttgcatgaagtcattgcttaaactcaggtcgaataac
ggcacatctcaggatgcctacacattccagattattctggataaggagcaggtgacacag
actcccactgtccagcaactcctggatatctccttgctgtcttgtgggctcaagtttgag
gagatcccatcctgcctcatggtccacatgccaaggtttgggaagaagtacaagatgttc
ccctacattatcccctcaacagaatttgacatcacagatcttctatacaactccccccga
gaatgcttcctctgtgggcgtttggcaaagtacgagtgcccccagtgcctacaagaccgc
aagctccagccaggaagaatcaaacagtattgcactacctgcaagacacaggtgcacatt
catccctctcggcagagccactgccctaaagccctggcagtgccagcggaggtgccagca
gatgcccctgtacccaggcacaaaatgcagttgttcgctgtgctctgtatccacaccagc
cactatgtgtcctttgtaaagtatggccctggccctcgctcctggctcttcttcgacagc
atggcagacagatgtggtgatgaccagagtggctacaacattccagagatcagggcttgt
cctgaggtgggtgacttcctgtctcagtcagaggaggagctagcgcgggctgacccctcc
caggctggagagcctgtccgcaggctgctgagtgactcctacatgtgtttgtatcagagt
gcctccatggcactctacagataa
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