Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414312
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Entry
139414312 CDS
T10872
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139414312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139414312
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139414312
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
139414312
NCBI-ProteinID:
XP_071018329
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All DBs
Position
7:52828030..52828605
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AA seq
154 aa
AA seq
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MAPTYTRDSDNTMLSTKDKHKLRKPVVEKMRRDRINTCIEQLKTLLEREFHKQDPNAKLE
KADILEMTVGFLKQQLQPQRPVLQRAHSEGYSQCWRETLHFLSSSSMKDTMLHNLQRAGQ
DICLSSPLSSQHQNHSQGPVKQAITGHKSVWRPW
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggctcctacctacaccagagactctgacaacaccatgctctctactaaagacaaacat
aaactaaggaaaccagttgtggagaagatgcgtagagaccgcatcaacacctgcatagag
cagctcaagaccctgctggagagggagttccacaaacaggaccccaatgccaagctggag
aaggctgacatcctggagatgacggtggggttcctgaagcagcagctgcagcctcagcgc
ccagtccttcagagggcccacagtgagggctactcccagtgctggagggagacactgcac
ttcctgtcttccagctccatgaaggacacgatgctccataacctccagagagctggacag
gacatctgtctctcctctccactctcctcccaacaccaaaaccacagccagggcccagtg
aagcaggccatcacaggccacaaatcagtctggaggccttggtag
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