Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414316
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Entry
139414316 CDS
T10872
Name
(RefSeq) paired box protein Pax-7-like isoform X1
KO
K09381
paired box protein 3/7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139414316
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139414316
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
139414316
NCBI-ProteinID:
XP_071018333
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Position
7:complement(53247090..53319017)
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AA seq
518 aa
AA seq
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MATLPGTVPRMMRPAPGQNYPRTGFPLEGQYTGPEYVYCGTVSTPLGQGRVNQLGGVFIN
GRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPR
QVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASVSSISRVLRARFG
KKDDDDDSDKKDEDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFT
AEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN
HLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSMHQGGLSDGSSP
YGLSSNRHSFSSYSDTFMSQSAASNHMNPVSNGLSPQVMSILSNPNAVPSQSQHDFSISP
LHGSLESSNPISASCSQRSDSIKGVDSLSSPQSYCPPTYSATSYSVDPVTAGYQYSQYGQ
TAVDYLTKNVSLSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctactttaccaggaacagtgcctcgaatgatgcgccctgcgccaggccagaactac
ccccgcaccggattccctctggaaggacaatatacaggacctgaatatgtttattgtgga
acagtatcaacccccctgggccaaggtcgggtgaaccagctcggtggagtgttcatcaac
gggaggccgctgccaaatcatatcagacacaagatagtagagatggcccaccatggcatc
cgaccctgcgtaatctcgcgacagctacgagtttcccatggttgtgtctccaaaatcctc
tgtcggtaccaggagaccggttcgattcgtcccggggcaataggaggcagcaagcctagg
caggtatcaactccggatgtggagaagcggattgaggagtacaagcgagaaaaccccggg
atgttcagttgggagatccgggacaagctgctgaaggacggggtgtgcgacagaagcaca
gttccttcaggtgaggcttctgtgagctccatcagccgagttctgagggcccgattcggc
aagaaagatgacgacgacgatagtgataagaaggatgaagacggagaaaagaaaacaaag
catagcatcgatggcattctcggcgataaaggtaatcgtacagatgagggttcagacgtg
gagtcggagccggaccttcccctgaagaggaagcagcgtcgcagccgcaccaccttcaca
gccgagcagcttgaggagctggagaaggcctttgagaggacacactacccagacatctac
accagggaagagctggcccagaggaccaagctcactgaggcccgcgtgcaggtgtggttc
agcaacagaagggccagatggcgcaagcaggcaggagccaatcagctggccgccttcaac
cacctgttacctggaggcttcccgcccacagggatgcccagcctacctacctaccagcta
cctgagtcctcataccccggcactacactgtcacaggatggcagcagtacgttgcatcgg
ccccaacccctgcctccgtcctccatgcaccagggcggcctctctgacggcagctccccc
tacggcctctcgtccaatcgccacagcttctccagctactcagacaccttcatgagccaa
tcagctgccagcaaccacatgaacccggtcagcaacggcctctccccacaggtgatgagc
atcctgagtaaccccaacgccgtgccctcccagtcccaacatgacttctccatctccccc
ctccacggcagcctggagtcctccaaccccatctcagccagctgcagccagcgctctgac
tccatcaagggggtggacagcctgagctccccccagtcctactgtccccccacctacagc
gccaccagctacagtgtggaccccgtcaccgccggataccagtacagtcagtatggacag
actgcagtggactacctgactaagaacgtgagtctgtccacccagaggaggatgaagctg
ggagaccactctgctgtcctgggactgctgcaggtggagacgggacaggcctactga
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