Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414349
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Entry
139414349 CDS
T10872
Name
(RefSeq) coiled-coil domain-containing protein 174-like
KO
K25178
coiled-coil domain-containing protein 174
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139414349
03041 Spliceosome [BR:
ocla03041
]
139414349
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139414349
Spliceosome [BR:
ocla03041
]
Complex C
Other components
EJC/TREX
139414349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
139414349
NCBI-ProteinID:
XP_071018367
LinkDB
All DBs
Position
7:57427971..57431765
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AA seq
585 aa
AA seq
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MDKKKKQYAVTASSLVDLKAELYRKQEQFKHEKLGQDAGTSTKAPKSKKPNVWSKQNEGV
SERGQKDVELVAEEENNLDRAKRKLEEKAKLYEQMTKGDFLDEETEGLFLVDFTQKIIDK
KRENHAQRESEREDRESSSPIPPPENPGEEWVDYVDALGRSRRCMKKDLPGFKKMDKDFQ
GKRLDPAEKDLLSEDMRRELQRQEWEREEEEAMNRPVGPIHYENIREQEARELGVGYFAF
SQDQEQRRKQRETLDMLRDQTTDQRSKRDQLKEKRKTLLDARLAKVRQRKMKKAKLDGTE
DDQGDEHNQEGKEDLIGPLPPSGGAPEEAPALKKVVVEIQERRDTKPGVPHVREWDRGKV
DFFGEWTSRRRDERESEFAPPSAYFSNNKRQSYGKEAKREKDKPKMAFKWSEGQLGGRKV
PQANPKSTPVSQPQPRSTPIPQPSTPVPSQPQPTPSPAQPQNTVHLQNTPAPPEPQCPAQ
PPPQYSPSQQPQPQYTPPPPPPQTHPQFDYPFQPQFAHLPFHPQYPTPPHLQYGAPPHYP
PQYTPQYPPQPQTQPQCHPQTQPPPQTQPPSQSLDDMLSFYKNYS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaagcaatatgccgtgactgcttcatctctggttgatctcaaagct
gaactctataggaaacaagagcaattcaaacatgaaaaattggggcaagatgctggaact
agtaccaaagcccccaaaagcaagaaacctaatgtatggagcaaacagaatgagggtgtt
tcagagcggggacagaaagatgtggaactggtggcagaggaagagaacaaccttgacagg
gcaaagcgcaagctagaggagaaggcaaaactgtatgagcagatgaccaaaggagacttt
cttgatgaggagacagagggactttttctggtggatttcacccagaagattattgacaag
aagagagagaatcatgcccaacgagagagtgagagagaggatagagagagctcctccccc
atcccaccccctgagaacccaggcgaggaatgggtggactatgtagatgctttgggacga
tctcggagatgcatgaagaaagacctaccagggttcaagaaaatggacaaagactttcag
ggaaaaagacttgacccggctgagaaggacctgctgtcagaggacatgcgtagagagctg
caaaggcaggagtgggagagggaggaggaggaggccatgaacagacctgtgggtccaatc
cactatgagaacatcagggagcaagaggcccgtgagctgggtgtgggctactttgcattc
tctcaggaccaggagcagcgcaggaaacagagagagaccctggacatgctcagagaccag
acaacagaccagcgcagtaagagggaccagctgaaggagaagagaaagactctgctggat
gctcggctggccaaggtgaggcagaggaagatgaagaaggccaagctggacggaactgag
gacgaccagggagatgaacacaaccaagaagggaaggaggacctgattgggcccctaccc
ccatcaggtggagcacctgaagaggcccctgcattgaagaaggtggtggtggagatccag
gagaggagggacaccaagccaggagtaccccacgtcagagagtgggacaggggaaaagtg
gacttttttggcgagtggacgagtcggcggcgggatgagagggagtcggaattcgcccct
ccctctgcgtacttcagcaataataaaagacagagctatgggaaagaggccaaacgtgag
aaggacaaacccaaaatggccttcaagtggtccgaggggcagcttggagggcgcaaggtg
ccccaggccaaccccaaaagtactcctgtatcccagcctcagcccagaagtacgcctata
ccccagccaagtacccctgtaccctcacaacctcaacccacaccatcccctgctcagccc
caaaacactgtccatctccaaaatacacctgcacctccagaacctcaatgccccgcccaa
cccccacctcagtactccccctcccaacagccccaaccccaatatacaccaccacctcca
ccaccacaaacacaccctcagtttgattacccatttcagccccaatttgcacatctaccc
tttcatccccagtatcccactccacctcacctccagtatggagccccacctcactacccc
cctcaatacaccccacagtatcccccccagccacaaactcagccccagtgccaccctcag
acccagcccccccctcagacccagcccccctcccagagcctggatgacatgctgtccttc
tacaagaattattcttga
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