Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414437
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Entry
139414437 CDS
T10872
Name
(RefSeq) homeobox protein XHOX-7.1-like
KO
K09341
homeobox protein MSX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139414437
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139414437
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
139414437
NCBI-ProteinID:
XP_071018454
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Position
7:71366062..71367971
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AA seq
282 aa
AA seq
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MAPTVAMSALSGGLKTEDIPSRSGLVGTGEMQTNLSRVAEEKGIKPKVAILPFSVEALMA
DRKPSRDFSSPERSSMSGSSLTLGSRMGSLSRLDNSAPSLAIGSLFSVGDMNMQEDALVK
PESPESQDRNSWIQSPRFSPTPPRRLSPPSCPLRKHKTNRKPRTPFTTSQLLALERKFRQ
KQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKSKRLQEAELEKLKMAAKPMLPPAFGIS
FPFSAHVPSSYGGSHHFQRHSLPVSPMGLYAAHVGYSMYHLA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccccaactgttgccatgtcagctttatccggtggcttgaaaacagaagacattccc
tcacgttcgggtctcgttggcacaggagagatgcagaccaatttgagcagggtggcagag
gagaaagggataaagcccaaagtagcgattcttcccttcagcgtcgaggctctgatggcc
gacaggaaaccgagcagagacttttcatctccagaaagatcatccatgtcggggtcatcc
ctgacgctaggctcaaggatgggctcgctttcgagactggataactcggccccctccctg
gccatcgggtcgctgttctcagtaggcgacatgaacatgcaagaggacgcattggttaaa
cccgagagtccagaaagtcaagaccgaaattcttggatacagagccctcgcttttcgcct
actcctccacgaaggctaagtcccccctcctgtccactgagaaagcacaagaccaacaga
aagccccggacccctttcaccacgtcccagctcctggctttggagaggaagtttcgacag
aagcagtacctctccatcgccgagcgcgcagagttttccagttcgctcaacctgacggag
acgcaggtgaaaatatggtttcagaacagacgagccaaatctaagaggctccaggaggca
gaactggaaaaactgaaaatggcagccaaaccaatgctgcctccagcgttcgggatttcc
tttccgttcagcgcacacgtcccctcgtcttatggagggtcgcaccactttcagaggcac
tccctgccagtgtctcccatgggactgtatgcagctcatgtcggatacagcatgtatcac
ctcgcctga
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