Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414492
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Entry
139414492 CDS
T10872
Name
(RefSeq) asporin
KO
K08120
asporin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139414492
Proteoglycans [BR:
ocla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
139414492
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_5
LRR_9
LRR_14
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
139414492
NCBI-ProteinID:
XP_071018504
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Position
7:84439447..84462197
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AA seq
357 aa
AA seq
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MRGFLLLCLLALGHAKPYQPINVLDFMRDHEIMMQDADDDDDDDDNALTDCPFGCQCSLR
VVQCSDLGLLSVPENIPADTLMIDLQNNDITEVKEDDFKGINKIYALFLVNNKISKIHPK
AFRNMDRLQLLYLSYNQLTQIPANLPRNILELRIHDNKISNIQKEAFKGLKSVHVLEMSA
NPLANNGIELGAFDGMETLYIRIAEAKLTAVPKDLPSSLTELHLDYNKITKVEIEDFFRY
KKIQRLGLGFNQIKFVENGSFASIPNVREIHLDNNKLKKVPPGLNSLRYLQVVYLHANSI
SSVGVNEFCPVRSSVKKTLYTGISLFSNPVKYWDVQPATFRCVSGHRGVHLGNNRRK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttcctgctgctgtgtcttctggcactgggccatgccaagccctaccagcca
attaacgtcttggacttcatgagggaccatgaaatcatgatgcaggacgccgatgatgac
gatgatgatgacgacaacgcccttacggactgccccttcggctgccagtgctccctacgg
gtggtgcagtgctctgatctagggttgctctccgtgcccgagaacattcccgccgacacg
ctaatgatcgacctccagaacaacgacatcaccgaggtcaaggaggacgacttcaaaggc
attaacaagatctacgccctgttccttgttaacaacaagatctcgaagatccatcccaaa
gctttccgtaacatggatcggctacagctgttgtacctgtcctacaaccagttgacacag
atacctgccaacctaccccggaacatcctggagctgcgtatccacgacaacaagatcagc
aacatccagaaggaggccttcaaagggctcaagtctgtgcatgttctggagatgagtgct
aacccgttagctaacaacgggatagagctaggagcattcgacggcatggaaacgctgtat
atcaggatcgcggaggccaagctcacagctgtacctaaagacctcccatcttcactcaca
gagcttcacttggattataacaagatcaccaaagtagaaattgaggactttttcagatat
aaaaaaatacaaagattaggactgggcttcaaccaaatcaagtttgttgagaatggaagc
ttcgccagtatacccaacgtccgtgagatccacctggataacaacaaactgaagaaggtt
ccgcccggcctaaactcactgcggtatctacaggtggtgtacctccatgctaacagcatc
agcagtgtgggggtgaatgagttctgccctgtccgctccagtgttaagaagaccttgtat
acaggcatcagtctgttctctaaccctgttaagtactgggacgtccagcccgccactttc
cgctgtgtgtctggacacagaggggttcatctgggcaacaaccggaggaagtaa
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