Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414884
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Entry
139414884 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139414884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139414884
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139414884
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
139414884
NCBI-ProteinID:
XP_071018583
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Position
8:5420155..5487000
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AA seq
570 aa
AA seq
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MERGLFNHLFSARTAILCCFFLCKSIFCHEKTHSHAEDELFKKLFIGYNKWSRPVPNISD
VVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWRPSDYDNVTSIRVPSELIWV
PDIVLYNNADGEFAVTHMTKAHLFYNGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFG
SWTYDKAKIDLERFENTVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIR
RLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTS
LVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPGTHKMPRWVHSVFLDLIPRWLFMRR
PAPDGRRRRLLMLQQGAAVARYQGRTINPRPAGLGLPPFLSTSASWLRDGGGTTEDLQRQ
TLCYEDLELGELTSYFSFRPPSPRPPGSTPPPQQNHPLPGAGQPHKRLDGGVEGGGGGVN
RRVNPTQRPANLVSDSREIEFPLSPSVIRALEGLHYIADHLRAEDADFSVKEDWKYVAMV
IDRIFLWMFIIVCLLGTIGLFLPPWLAGMI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtggattattcaaccacctgttctcagcaaggaccgctatactctgttgtttc
ttcttatgtaagtcaattttctgtcatgagaagacccactcacatgcggaggacgagctc
ttcaagaagctcttcatcgggtacaacaagtggtccagacccgtacccaacatctcagac
gtggtcatcgtcaagttcggactctccatagcacagctcattgatgtggacgagaagaat
cagatgatgaccaccaacgtctggctgaaacaggagtggaatgactacaagctacgctgg
agaccgtctgactacgacaacgtcacgtccatcagagtcccatctgaactcatctgggtc
ccagacatcgtcctctacaacaatgcagacggtgagttcgccgtgacccacatgaccaag
gcccacctgttctacaatgggaaggtgcgctgggttcccccggccatctataagtcctcc
tgctctatagacgttaccttctttcccttcgaccagcagaactgtaagatgaagtttggc
tcttggacctacgacaaggctaaaatagacctggaacgcttcgagaacactgtggatctg
aacaactactgggagagtggagagtgggccatcatcaacgcagtgggaacctacaacacc
aagaagtacgactgctgtcatgagatctaccctgatatcacctacttcttcatcatcaga
cggctgcctctcttctacaccatcaacctgatcatcccctgtctgctcatctcctgtctg
accgtcctagtcttctatctcccctcagactgtggggagaagatcactctgtgtatctcc
gtcctcctctccctcaccgtcttcttgctcctcatcacggagatcatcccttccacctcc
ctggtcatccctctgattggagagtatctcctcttcaccatgatcttcgtcactctctcc
atcgtcatcaccgtgtttgtcctcaacgtccaccaccgctccccggggacccataagatg
cctcgctgggtccactctgtcttcctggacctgatccccaggtggctgttcatgaggcgg
cccgcgccggacggacggagacgcaggttgttgatgctccagcagggggcagcggtggca
cggtaccagggacggaccatcaaccccagaccagcaggcctaggccttcctcccttcctc
agcacctcagccagctggctccgggacggaggagggacaacggaggacctccaaagacag
accctttgttatgaggaccttgagctgggggagctgacgtcttacttctccttccgtcct
ccgtcacccagacctccgggctccacccctccgccccagcagaaccatccactcccaggg
gcagggcagcctcataaacgcctggatggaggggttgaaggaggaggaggtggggtgaat
agaagggttaacccgacccagcgaccggctaacttggtgtcagactctagagagatagag
ttccctctgtctcccagcgtgatacgtgctctggagggactgcactatatcgcagaccac
ctgagggcagaggacgcagacttcagtgtgaaggaagattggaagtacgttgccatggtg
atcgaccgtatcttcctgtggatgtttatcattgtgtgtctcctaggaaccattggactc
ttcctccctccctggctggctggcatgatatag
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