Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414923
Help
Entry
139414923 CDS
T10872
Name
(RefSeq) tumor necrosis factor alpha-induced protein 2-like isoform X1
KO
K19989
tumor necrosis factor alpha-induced protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139414923
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
139414923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec6
DUF6614
Motif
Other DBs
NCBI-GeneID:
139414923
NCBI-ProteinID:
XP_071018654
LinkDB
All DBs
Position
8:10425053..10446716
Genome browser
AA seq
683 aa
AA seq
DB search
MKFSVLHILPRRPRKTKEEMGAVGHDPVAATVLSPVMEGSAKTVHGRFRHKLKMPQILGF
VPRPRSPKPIVESNPLQTEVVMDFMENLKENRLVEACQQLLLREDQLFGQETMTIEGLVQ
VCNEDDKDTLQKDYETLLLHLWMAVHTTFSSTPSGEHLEILRSAVETITLLEEKDQQWEG
RPEGSSEAPVWRPHQCRHTHDNLLEKIVDSQMRNAKVEEDNISISSVDNLSTSMKREVCR
MGKRLKEDVLRVARDIRDCYPPDFDVCNLYVRLYHQKFSARLTELARSGLDVDDCNYLLC
WVNNYYPNDILKHKDLEGHINMESLGTILSEKDLTTLEEQYLLQKESRVRTWFSKALSKE
EEGWLSGKSPELIDGYCFCPLAIDIIQAVDGAMREARTILGSEAKAQRILCQLDSFLISY
KRSLEEFVKARRENTQAVVKANLVNIEQFRDFIVRREESIPEEIRTSCMSTLADLRDCGY
GYFTGPIHEELRVQYHRLWTQAWFTGGHMVLDEVLGTLDRHMQQFTDLKPICVEELLGRL
HMEMMVEYVKRMMKRKMRLKDKEQQETAAKLLAEDSSKLSTYFTEAGSKICWLSEVLPKM
AEVVRLQDPGSIQLEIVTLARDFPDLSWRHISALLSLKANLSTADVRGIKESLEVNRPSV
TSSSTNPPFFSKVPAGKFWHMPS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttctgttctccacatactgcccagaagaccgaggaagaccaaagaggaaatg
ggtgcggtcggacacgacccggtggcagcgactgttctatcacctgtaatggagggcagt
gccaaaacagtacatgggaggtttaggcataaactgaagatgccccaaatactaggcttt
gtgccaagaccacggagccccaaacccatagtggagagcaatccacttcaaacagaggtg
gttatggactttatggagaacctgaaggaaaatcgcttggtggaggcttgccagcagttg
cttttgcgagaggatcagctctttggccaagaaaccatgacgatagaggggttggttcag
gtttgcaacgaggacgataaagacacgctccaaaaagactatgaaaccctgctgctccac
ttatggatggcagttcacaccacctttagttccacaccctcaggagaacacctagagata
cttcggagtgcggtggaaaccataacgctgctggaagagaaggaccagcaatgggaaggg
cggcccgagggcagcagcgaggcccccgtgtggcggccacaccagtgccggcacacccac
gacaacctgcttgaaaaaattgtggattctcaaatgaggaatgcgaaagtggaggaggac
aatattagcattagcagtgtggacaacctgtcaacgtccatgaaaagggaggtatgtagg
atgggcaagcgtctgaaggaggacgttctcagggtggccagggacataagggactgctac
cccccagactttgacgtgtgcaacttgtatgtgagactttaccatcagaagttctcagca
aggttaacagaactggcccgctctgggctcgatgtggatgactgtaactacctcctctgc
tgggtgaacaattactatccaaatgacatcttaaaacacaaagaccttgaggggcacatc
aacatggagtctttgggaactattttatctgagaaggatctcacaacattggaggagcag
tatctactacaaaaagagagtagagtcaggacctggttctccaaggctctcagtaaggag
gaggagggttggctcagtggaaagagtccagaactcattgatgggtactgcttctgtcct
ctggccattgacatcatacaggctgttgatggggccatgagagaggccaggactattctg
ggcagtgaggctaaagcccaaagaatcctttgtcagctggacagcttcttgataagctat
aagagatctcttgaagaatttgtgaaggcaagacgggagaacactcaggcagtcgtgaaa
gctaacctggttaacattgaacaattcagagacttcatagtgagaagagaggagtcaatc
ccagaagagatcaggacaagctgtatgtccacattggcagacctgagagactgtggctac
ggatacttcaccggccccatacatgaggagctcagggtgcagtaccataggctgtggacg
caggcctggtttactgggggtcatatggtactggatgaagttctggggacactggacaga
cacatgcagcaattcacagacctcaaacccatctgtgtggaggagctgctgggccggctc
cacatggagatgatggtggagtatgtgaagaggatgatgaagaggaagatgaggctgaag
gacaaggagcagcaggagacagcagccaaattactggctgaagacagcagcaaactgagc
acctactttactgaagcggggtccaaaatatgctggctgagtgaggtcctccctaaaatg
gcggaggtggtcagactgcaggacccaggaagcatccagctggagatcgtcaccctggct
agggacttcccagaccttagttggagacatatttcggctctactttccctcaaagccaac
ctatccactgctgatgtccgcggcatcaaagagagcctggaagtgaaccgtccttcagtc
acctcctccagtaccaacccaccattcttttccaaggttccagcaggcaaattttggcac
atgccatcttaa
DBGET
integrated database retrieval system
