Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414944
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Entry
139414944 CDS
T10872
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139414944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139414944
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Serotonin (5-HT3)
139414944
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5686_C
Motif
Other DBs
NCBI-GeneID:
139414944
NCBI-ProteinID:
XP_071018700
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All DBs
Position
1:7763111..7772840
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AA seq
488 aa
AA seq
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MAAKDFSKMESQRWWVSSHQVLFIICCIMVQVPCLRCKIVVNCTNPNTISLLAALENVMK
LYSIRPVMNLSTPTNISMYFTLYGILGVEEKAQLLNTYIWLVKEWDNEFFSWDPVQCGTA
NISLPRERFWSPDVVINEFMDQSTAPIVPYVYIKHTGIVRDANPVRVVSSCKLDIYTFPF
DVQNCTFTFRSYIHHVSDIRIILGKKVEDILKRSISVLSTEGEWELMDIKSSKFKLSTFN
QGESNPYDELCFYIVLRRRATLYVVNLLIPSCFLITVDLFSFLLPPQNVDRSSFKMTLIL
GYSVFLLIVNDLLPITGSTIPLINVFFAICLALMVASLLETILITNLLVGSSNFHPVPGW
VRVLVLRFMGTLVWLPQKSRENKVILNPVARDVKVCPLVTVERQVQTGEPGKMWAEADDP
ALAELRKLGNELQSIRLQVAQHVDGNQISQDWMQVGYILDRLLFGVYCIFITFSFIVILS
IWSNSYNQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggatttttccaaaatggagtctcaacgatggtgggtcagttcccaccag
gttctgttcatcatctgctgcatcatggtacaggtgccatgcctgagatgtaagatagtg
gtgaactgcaccaaccccaacaccatatcccttctggccgccctggagaacgtcatgaag
ttgtactccatacgacctgtcatgaacctctcaacccccaccaacatcagcatgtacttc
actctctacggcatcctgggtgtggaggaaaaagcacaactgttgaacacctacatttgg
ctggtgaaggaatgggataatgaatttttcagctgggacccagtccaatgcggcactgcc
aatatttctctccccagggaaaggttctggtcaccagatgtggtaatcaatgaatttatg
gatcaaagcacagctcccatcgtcccttatgtgtacattaagcatactggtatagtgcga
gatgccaaccctgtcagagtggttagctcctgtaaactggacatctacaccttccccttt
gacgtccagaactgcaccttcaccttcagatcctacatccaccacgtgtcggacataagg
attattttagggaagaaggtggaggacatcctgaaacgttccattagcgtgttgtccact
gaaggggagtgggagctgatggacatcaaatccagcaagttcaagttatcaacattcaat
cagggagaaagcaacccctacgatgagctctgcttttacattgtcctgaggcgcagagca
accctctacgtggtgaacctcctgatacccagctgcttcctcatcactgtggatctcttc
agcttcctgctgcctccccagaacgtggaccgctcctccttcaagatgaccctaattttg
ggctactccgtcttcctgctcatcgtgaatgacctgttgcccattacaggaagcaccatt
ccactgataaatgtgttcttcgctatctgcttggctctaatggtggccagcctgctggag
actattctcatcaccaacctcctggtcggctccagtaacttccaccctgtgcctggctgg
gtccgagtgctcgtcctgcgcttcatgggcaccctcgtctggctgcctcagaaatccaga
gagaacaaggtcatcctcaatccagttgcaagagacgtgaaagtctgccctctagtgacg
gtggagagacaggttcaaacaggagaaccaggtaagatgtgggctgaggcagacgatcca
gccctggcggagttgaggaagctgggcaatgagctccagtccatccgcctccaggtggcc
cagcatgtggacgggaaccagatctcccaggactggatgcaggtgggctacatcctcgac
cggctgctgtttggcgtctactgcatcttcatcaccttcagcttcatcgtcatcctcagc
atctggagtaattcgtacaaccagtga
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