Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414952
Help
Entry
139414952 CDS
T10872
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139414952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139414952
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Serotonin (5-HT3)
139414952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
139414952
NCBI-ProteinID:
XP_071018710
LinkDB
All DBs
Position
1:7777172..7811833
Genome browser
AA seq
443 aa
AA seq
DB search
MQTVFDRISFRPAVNLSNPTITNISFTLYAVLGVNEKTQILTTFLWLRLYWHHQFLVWDS
DACGGVTRISLPVKELWVPDIIVYEFVDDDVSQQCPYVYVNHTGHIRWDRMLRLVSACNL
EIFSFPFDVQNCSFTFGSYMHTIKDVRLTPALSFEEMSGNSKQYLEASGEWELVNIYGEA
SVLKFGIDEWDIITFWVVIKRRPVLYVVNLLIPSSFLMLIDILSFYLPPHSVDRASFKMT
LILGYTVFLLIMNDLLPSTANGTPLIGIYFSVCLALMVISLLETVIITNVLHSNSKKYRE
VPHWVRVVILKHIARMICYQWPEELVQPSASRGSTQDDKANRPNPTSPSWVLAPANPVHI
PAQHTTSTIGPGVVSSVPELRQICQDLSDLRAHLTSMQKEGVLQEQWCHVGYVLDFLLFR
IYLLLISCYAMVIICMWCIWINQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgtgtttgaccgcatatccttcagacctgcagtcaacctgagcaatcccacc
ataacaaacatctccttcaccctgtatgctgtcctgggcgtgaatgagaagacccagatc
ctcactactttcctgtggttgagattgtactggcaccatcagttcctggtttgggactct
gatgcttgtggcggagtcaccaggatttctctgccagtcaaagagctctgggtgcctgac
atcatcgtgtatgagtttgtggacgacgacgtgtcacagcaatgcccctacgtctacgtc
aaccacacaggccacatccgctgggacaggatgctgcgcctcgtcagtgcctgcaacctg
gaaatcttcagcttccccttcgatgtgcagaactgctcgtttaccttcggctcctacatg
cacaccataaaggatgtgaggttgactccagccctgtcctttgaggagatgtcggggaac
tcgaaacagtacctggaggctagtggggagtgggagctggtcaacatctatggagaggcg
tctgtcctcaagtttggcatcgacgaatgggacatcatcactttctgggtggtgataaag
cgcaggccagtgctctacgtggtcaacctgctcatccccagttccttcctcatgctcatc
gacatcctctccttctacctgccccctcacagcgtggaccgcgcctccttcaagatgacc
cttattttgggctacaccgtcttcctgctcatcatgaacgacctgctgcccagcacggcc
aacggcacccccctcataggaatttacttttcagtgtgtctggctctcatggtcatcagc
ctgttggagacagtcatcatcactaatgtgctccattccaactccaagaagtaccgcgag
gtgccccactgggtccgtgtggtcatcctgaagcacatcgcccgtatgatctgctaccag
tggcccgaggagcttgttcaaccctcagcctccagaggatccacccaggatgacaaggca
aacagaccaaaccccacaagcccttcctgggtccttgcaccagccaaccctgtgcacatc
cctgcccagcacaccacaagcaccattggtcctggggtggtgtcctctgtgcctgagctg
cgtcagatctgccaggacctgagtgacttgcgtgcccacctaacgtcgatgcagaaggag
ggcgtgcttcaggagcagtggtgccacgtaggctacgtactggacttcctgctcttccgt
atctacctcctcctcatctcctgctacgccatggtcattatctgtatgtggtgcatctgg
atcaaccaatga
DBGET
integrated database retrieval system
