Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139414990
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Entry
139414990 CDS
T10872
Name
(RefSeq) transport and Golgi organization protein 1 homolog isoform X1
KO
K23704
transport and golgi organization protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139414990
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
139414990
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
Motif
Other DBs
NCBI-GeneID:
139414990
NCBI-ProteinID:
XP_071018781
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All DBs
Position
8:14669860..14689859
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AA seq
1949 aa
AA seq
DB search
MAVNVSHVYILLLFIINFISNAATERRFSDFKRCADEECSMLLCRGKASSDFTGPDCRFL
SFKKGETVYVYYKLSGRRTDIWAGTVGSRFGYFHKDQLAINHIYTEKELEIPAQETDFVC
FDTGHDKFDSYDIESLLVSSLLLTDQDKSVQGTTETLDRNRSAESTTVEVDGPPPEVTLL
ENNEIDSDVPEDIDKVLEEVLEEFPEDKDPGHFDPLESSLPQPEIETLDAKGVESNTVVE
PTAERIKDDLQKYQLTTEDSVPDSVVEPEQGETKESLSEPLSKDDPELENAPDGFSEGRP
VPRLKTTLGTTFDAVTSDDEETRKVTPYDEEDEGSEEFEYQQDDKSDYHLRETPLLAFSE
EHSNLEHEDIDKVLEEVLEEFPEDKDPGHFESDQTDEEESPPETAEKQDSKDKNLWSSLG
DTVFNIVSGGERTAHVTGSEEEDDDDDDEGEIAPEEPPKIEEPKENIQLLANDPKQEPEV
SEQPHEVIFEEPIDSDFLEAVKMPNVDSQTLQLEDEPEEGDIEPSIPLADEAIPFEHTEE
AIAENLTVNESPVPKHVSQTEKLSDFDSNTIDSEQTQAVEELPIQKEPKENIQLLANEPQ
QEPEVTEQPHEDIFEEPIDSDFLEAVKMPNVDSQTLQLEDEPEEGDIEPEEGDIEPEEGD
IEPSVPPADEVIPFEHTEEALAENLTVNESPVPKHVSQTELLSDFDSKTNISEQKQAIEL
PIQKESRDFSQVENKLKPGGTELFRRFRGPNVPDPTKNTMVKERHEELPVDNEDLIDPEN
LEIEEELLEDENAALSSSKTEHTDKDKESRLEFGSEQSNNATETEVSSDELDVVQIEEAI
DIEPEEHDIEDSESAGLDQTHTPSLEDKVPDPLSGQEPEYSDNVLRLTLLRNHFKEQDMK
LFQKILGLQNLFRVEFLFSDLEQELNAALMSQTNTSEDIEKVLEAILEASETPILDEIER
MLDARENADVQQETGELDVEATILDNFQELAFTLHQKYSMTSDSAPLAEGSQLHPDTDGD
VSDAEEEKTFLHSGGDINEDNLTVTGEETKVPEEKPDHEGHNRPDLDMGLEEDVGHFNRN
QDNQPEEIQRGPQAILENTLDMGLVDMEHPSSGSLESPPVSDFQEEEQSSSSIVSVLIFS
GSLVTVVYEYLGIYAVMMVTCLPEEWKPGPDFYGVSWEPVLATAGAGFIGFLFLFWRSVL
SVKRKSYLTTEKEMADRMKTFEQEKEEILLKVAELQQQGEELKEKKNLSEKSATSSLEKI
QELKNLVQEMERQNECLDEEKNLLARSFDEERTKAAKHQDMMSEMDKTIEKLKRSRKKTQ
EALSKATILMEEAKLREDARNVQHHVLEKDIATLREENISLHHAANSWEEKHRELSEQIK
VYQKSQKDLEDSLAQKDHNVEVLSDLLGDLEACDDLKGGVVANGEAANDKQTVIRNRIKQ
MMDVTRVQTTLSVVEEERDRFMTKLLNEEKARKELEEQYQKLEHAILLVKSDKNHLENQY
KTLQQKNEIITEMYQQKENALQQKLTKEEFERRNNEDRLTEVDGKALEAEEEVKVCRQRI
KEIQDELKQTEKSYKAQIIEQEQKSHENWVIARAAERALLDEKKESTNLRIKLTEMSSKL
NELRRPLFKPTPGMAPMPLRRGDSYGPSPVSGGAPSPPLMMEGPGRPPSAPVGRRNEPYG
PRPPSDPHGRYPPDHKHPVAARPDTIAPRTSSPSSLDSSQTAPPQSQAEAQASTENPEAN
SGPRGPGSLLVSPISSPPDSGPGPLRPVISHPSGLCYRPPGPGPHHIPPPSPFMPPMYRP
ANGHPGMMPPGPPPPNGHPPGPMMPPGQRPPPPGAYGPPHHRGPPPPHYGPVPPPFGVRG
GPPMARPMGPPRPYMHYGPRDHSIPPQHLPLGAAPYPPHSGPRDFPGQPPMQQAPHGHDS
SVGPQGQDYSSQQAAATPQDSVSSSMGEP
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaatgtatctcatgtatacattttacttttatttattattaatttcatatcc
aatgccgccaccgaaaggagattctccgacttcaaacgatgtgctgacgaagaatgcagt
atgctcctgtgccggggtaaagcatcaagtgatttcactggaccagactgtcggttcctg
tcttttaaaaaaggagagacggtatatgtctactataaactctcaggcagaaggacagat
atatgggcgggaactgttggtagccgctttggttacttccataaggaccaactcgcaatc
aatcacatatacactgaaaaagaattggagattcctgctcaggaaaccgactttgtttgt
tttgacaccggacacgataagtttgacagttatgacattgagtcactgttagtctcctcc
ttattgttaacggaccaagacaagtctgtacaaggaaccacagagactttagaccgaaac
agaagtgcagagagcaccacagtggaagtggatgggcctccacctgaagtgactctgtta
gaaaacaatgagattgatagtgatgttcctgaggacattgataaggttttagaagaggtt
ttagaggagtttccagaggataaagatccaggccattttgatcctttagagtcctctcta
cctcagcctgaaattgaaactcttgacgcaaaaggagttgaatctaacacagtagttgag
cccacagctgagaggatcaaagatgaccttcagaaatatcagctgacgaccgaggactct
gtgccggacagtgttgttgaaccagagcaaggtgagactaaagaaagcctttcagaacct
ctatccaaagatgatcctgagttggagaatgcgccagatggtttttcagaaggcagacct
gtccctcggttgaaaactacacttggaacaacttttgatgctgtcacctccgatgacgag
gaaactaggaaggtgactccatatgacgaggaggacgagggaagtgaagagtttgaatat
cagcaggatgacaaaagtgattatcatcttagggaaactccattgctggctttttctgaa
gagcattctaatttagaacacgaagacattgataaggttttagaagaggttttagaggag
tttccagaggataaagatccaggccattttgaatctgatcagacagatgaggaagagagt
ccaccagagacagctgaaaaacaggactccaaggacaagaacctatggtcttcattaggt
gatacagtttttaacattgtcagtggtggggaaagaacagctcatgttacaggttcagag
gaagaggacgacgacgatgacgacgaaggtgagattgcaccagaggagcctcccaaaatt
gaagaacccaaggagaatatacagctgctagccaacgacccaaagcaggagccagaggta
tcagaacagccacatgaggtcatctttgaggaacctatagactctgatttccttgaggct
gtcaaaatgcctaatgtggattcccagactttgcagttggaggatgaacctgaagaaggt
gacattgaaccttcaataccacttgctgatgaggcgattccttttgaacatactgaggag
gctatagcagagaatcttaccgtaaatgaaagcccagtccctaaacacgtctcacagaca
gaaaagctctcagactttgatagtaatactatcgactcagaacagacgcaagctgttgaa
gaactccccatacaaaaagaacccaaggagaatatacagctgctagccaacgaaccacag
caggagccagaagtaacagaacagccacacgaggacatatttgaggaacctatagactct
gatttccttgaggctgtcaaaatgcctaatgtggattcccagactttgcagttggaggat
gaacctgaagaaggtgacattgaacctgaagaaggtgacattgaacctgaagaaggtgac
attgaaccttcagtaccgcctgctgatgaggtgattccttttgaacatactgaggaggct
ttagcagagaatcttacagtaaatgaaagcccagtccctaaacacgtctcacagacagaa
ctgctctcagactttgatagtaaaactaacatatcagagcagaaacaagctattgaactc
cctatacaaaaagagtcaagagatttctcacaagtagagaataaattgaaaccgggtggt
acagagcttttcagacgatttagaggacctaacgtcccagatccaactaaaaacacaatg
gttaaagagaggcatgaagaactccctgtagacaatgaggatttgatagacccagagaac
ttggagattgaagaagaattgctagaggatgaaaatgcagcattgtcttcatccaaaact
gagcacactgataaggacaaagaaagtagattggaatttgggtcagagcaatccaataat
gctacagaaactgaggtatctagtgatgagttggatgttgtccaaattgaggaggctatt
gacatagaacctgaggagcatgacatagaagattcagaaagcgcaggcttggatcaaaca
catacaccctcacttgaagacaaagttccggatcccctttcaggccaagagccagaatac
agtgataatgtgttgaggctgacgctactgcgcaaccacttcaaggaacaggatatgaag
ctcttccagaagattctgggtcttcagaacctcttcagggtggagttcttgttctctgac
ctggagcaggagctgaatgctgccctgatgtcacagacaaacaccagtgaggacattgaa
aaggtgctggaggccattttggaggcctctgagaccccaatcctggatgagattgagagg
atgctggatgcccgggagaatgctgacgtacagcaggagactggcgagcttgatgtggaa
gccaccatcttggacaacttccaagagttggcgttcaccctgcatcagaagtactcaatg
accagcgacagtgctcccttggcagagggcagtcaactacaccctgacaccgatggggac
gtgtctgatgcagaggaagaaaagacgttcctgcactctgggggggacataaacgaggac
aacctcacggtgacgggtgaagagactaaagtacctgaggagaagcctgaccatgaaggc
cacaacagaccagatctggatatgggtcttgaggaggatgtggggcattttaacagaaac
caagacaatcaaccagaagaaatccagaggggccctcaagctattttggaaaataccttg
gacatgggacttgttgacatggagcacccttcctcaggctctttggagtcgccccctgtt
tctgatttccaggaagaggagcagagtagttcatcaatcgtatcggtgttaattttctct
ggtagtctagtcaccgtggtttatgagtaccttggaatatatgctgttatgatggtcacc
tgcctgccagaggaatggaagccaggtccagacttttacggcgtgtcctgggaacccgtg
ctggccactgcaggtgccgggttcatcggcttcctcttcctcttttggaggagtgttcta
tctgtcaaaaggaagtcctatctaactactgaaaaagagatggcagacaggatgaaaaca
tttgaacaagagaaggaggagatactcctaaaggttgctgaactgcaacaacagggtgaa
gaactcaaagaaaagaaaaatctgtctgagaaatctgccacctcatctctggaaaagatc
caagaattaaaaaatcttgtgcaagagatggagagacaaaatgagtgcctggacgaggaa
aagaacttgctcgccagatcctttgacgaagagcggacaaaggcggcgaaacatcaagat
atgatgtcagaaatggacaaaactattgagaagttgaagcggagcagaaagaagactcag
gaggctctctcaaaggctaccattctgatggaagaagccaagctccgtgaagatgcacgg
aatgtccagcaccatgttctggagaaggatatcgccaccctgagagaggagaacatctcg
ctgcaccacgctgccaattcgtgggaggagaagcacagggagttgagcgagcagatcaaa
gtctaccagaagtcccagaaagacctggaggactcccttgctcagaaggaccacaacgtt
gaggttttgtctgacctcctgggagacctcgaagcctgcgacgacctgaaaggaggcgtc
gtggctaacggggaagccgctaacgacaagcagaccgtcatccgaaaccgcattaagcaa
atgatggatgtcactcgggtccagaccactctgtctgttgtggaggaagagcgcgatcgc
ttcatgaccaagctgctgaatgaagagaaagccaggaaagagctggaagaacaataccag
aagctggagcatgccatcttgttggtgaaaagtgataagaaccacctggagaaccagtac
aagaccctgcagcagaagaacgagatcatcacagagatgtaccagcagaaggagaacgcc
ttgcagcagaagctaaccaaggaggagtttgagcgtcgcaacaacgaggataggctgact
gaggtggacggcaaggccctggaggccgaggaggaggtcaaggtgtgcaggcagcgtatc
aaggagatccaggatgagctgaaacagactgaaaagtcctacaaagcccagatcattgag
caggagcagaaatcccatgagaactgggtaattgcacgcgccgcagagcgagctctgttg
gacgagaaaaaggaatcaaccaacctccgtatcaaactgacggagatgtccagcaagctg
aatgagctccgtaggcctctattcaaacccacccctgggatggctcccatgcctctccga
cgaggtgactcgtacgggccctcgcccgtgagcggaggtgccccgtccccccctctcatg
atggagggtcctgggcgacccccctctgcccctgtggggagacggaacgagccctacgga
ccacgacctccatctgaccctcacggtcgttacccccctgaccacaaacacccagtggct
gccagacctgacaccattgcaccacggacatcctctccaagcagtctggacagctcgcag
accgctccaccacagtcacaggctgaggcccaggcctccacagagaacccagaggcaaac
tcaggacctcggggccctggctccctcctggtctctcctatcagctccccccccgactca
ggccccggccccctcagaccagttatcagccatccctccggactctgctaccgtcctcct
ggccctgggccccaccacatccctcctccctcacccttcatgcctcccatgtaccgacca
gccaacggacacccaggcatgatgcctcccggacccccaccacctaatggacacccacct
ggccccatgatgccacccggacagcggcctccacctcctggtgcctacggccccccacac
caccggggccctcctccacctcactatggaccagtgcctcccccattcggtgttcgcggc
ggcccccctatggcccgacccatgggacctccacgtccctacatgcactacggaccacgt
gatcactccatcccaccccagcacctgcccctaggagcggccccataccctcctcacagt
ggccccagagacttccccgggcagccccccatgcagcaggccccccatgggcatgactct
tctgtgggtccccaggggcaagactacagctcccagcaggcagcagctaccccccaggac
tcagtcagctcctccatgggagagccttag
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