Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415029
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Entry
139415029 CDS
T10872
Name
(RefSeq) unconventional myosin-VI-like isoform X1
KO
K10358
myosin VI
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139415029
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139415029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139415029
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139415029
04147 Exosome [BR:
ocla04147
]
139415029
Membrane trafficking [BR:
ocla04131
]
Others
Actin-binding proteins
Myosins
139415029
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139415029
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139415029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MYO6_lever
Myosin-VI_CBD
Myosin_N
IQ
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
139415029
NCBI-ProteinID:
XP_071018877
LinkDB
All DBs
Position
8:17075725..17219817
Genome browser
AA seq
1305 aa
AA seq
DB search
MEDGKPVWAPHPGDGFQLGTIVDIGADSLTIEPLKQGQKSFTAQINQVFPAEDDVNKHVE
DNCSLMYLNEATLLNNVRVRYSKDRIYTFVANILIAVNPYYDIPKLYASETIKQYHGRSL
GTLPPHVYAIADKAYRDMRVLKMSQSIIVSGESGAGKTENTKFVLRYLTTSYGTGQDIDE
RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKNTVVGGFVSHYLLEKSRICQQSQ
EERNYHIFYRLCAGASEDIRTKFHLESPDAFRYLNRGCTRFFANKDTDKQILQNRKSPEH
LKAGPLKDPLLDDQGDFNRMCGAMKKIGLDDMEKLDLFRVVAGVLHLGNIDFEEAGSTSG
GCTIKNQSSQTVEYCAELLGLGEQDLSVSLTSRVMLTTAGGAKGTVIKVPLKVEQANNAR
DALAKAVYSRLFDHVVTRVNQCFPFHSSANFIGVLDIAGFEYFEHNSFEQFCINYCNEKL
QQFFNERILKEEQELYQKEGLGVNEVRYVDNQDCIDLVEAKLVGILDILDEENRLPQPSD
QHFAETIHNKHKNHFRLTVPRKSKLQVHRNVRDDEGFIVRHFAGAVCYETTKFVEKNNDA
LHMSLECLVSESKDRFIRELFENSNNTKDSKQKAGKLSFISVGNKFKTQLNILLEKLRST
GSSFIRCIKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRAPFHELYNMYKQY
MPAKLTRLDPRLFCKALFKALGLNENDYKFGLTRVFFRPGKFKEFDQIMKSDPDHLAELV
KKVNQWLICSRWKKVQWCSLSVIKLRNKMLYRAIACIKMQKTVRMWLCRRKHKPRIDGLV
KVRNLKNRMDKFNEVIAGLKEGKQEMSMQIQGLDDAINTTMLKIKTTAMTRIDMDHEYQA
LVTRSEELLTAMQNKKKEEEEKERLKKIQEEMAREKKRREEEEQRRKQDKEDRRLKAEME
QKRKHEEEERKQREKEERKLQAEMDVQLEAEREEAAARQNILEQERRDRELAMRIAQSEA
ELIPEDTQNDAGLRSNGTSGGPSSPERATGAGGSQKLKSMSMEEMAKEMSELLSRGPQVQ
ATKAAAAGTKKYELSKWKYAELRDAINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRG
NNPGVTEQRAPKSVTDYDLAPRVRQAPQANSAPPIPARQHEVAMNRQQRYFRIPFIRPGD
QYKDPQNKKKGWWYAHFDGPWIARQMELHPDKQPILLVAGKDDMEMCELSLEETGLTRKR
GAEILPRQFEEIWERCGGIQYLRRAIEKKQARPTYATAMLKTLLK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgggaagccggtgtgggcgccccacccaggagatgggttccagctggggacc
atagtggacataggagcagacagtttgaccatcgagcctctgaaacaggggcaaaagagc
tttacggcccagatcaaccaagtgtttccggctgaggatgatgtcaacaaacatgtggaa
gacaactgttctttaatgtacttgaatgaagccacactcttgaacaacgtccgtgtgcgg
tatagtaaagacagaatttatacgtttgtagctaatatcctgatagcagtgaacccctac
tatgacatcccaaagctctatgcttccgagaccattaaacagtaccatgggaggtccctg
ggcacccttccgccccacgtctacgctatcgctgacaaggcctacagggacatgagggtg
ctgaagatgagccagtccatcatcgtgtccggggagtctggtgccgggaagactgagaac
accaagtttgtcctccgatatttgacaacatcctatggaacaggtcaagatattgatgag
agaatagttgaagccaatcccctgctagaagcttttggaaacgctaaaactgtcaggaat
aacaacagtagtcgctttgggaagtttgtagagatccacttcaacgaaaagaatactgtg
gtgggaggcttcgtgtcccactacctgctggagaaatccaggatctgccagcagagccag
gaggagaggaactaccacatcttctaccggctgtgtgctggagcctccgaggacatcagg
accaagttccacctggaatcaccagacgccttcaggtatttgaacagaggatgcactcgc
ttctttgcaaacaaggacacggacaaacagatccttcagaaccgcaagagtccagagcac
ctgaaggctgggcccctgaaggaccctctgctggacgaccagggggacttcaacaggatg
tgcggggccatgaagaagatcggcctggatgatatggagaagctggacctgttcagggtg
gtggccggggtgctgcacttgggcaacatcgactttgaggaggcaggcagcacatcaggt
ggctgcactataaagaaccagtcaagccagacggtggagtactgtgctgagctactgggt
ctgggagagcaggacctgagtgtcagcctcacgtccagggtcatgctcaccacagcaggg
ggcgccaaaggaacagttatcaaagtgccactgaaagtggagcaggcaaacaacgcacgg
gacgccctggccaaggctgtgtacagccggctgtttgaccacgtggtcaccagggtcaac
cagtgcttccccttccactcttctgccaacttcatcggggttctggatatcgcaggcttc
gagtactttgagcacaacagctttgagcagttctgcatcaactactgtaatgagaagctg
cagcagttcttcaacgagcgcattctgaaagaagaacaagagctgtatcagaaggagggc
cttggagtgaacgaggtccggtatgtcgacaatcaggactgcatagacctcgtggaggcc
aagctggtgggcatcctggacatcctggatgaagagaaccgtctacctcagcccagtgac
cagcactttgcagagaccatacacaacaaacacaagaaccacttccgactgaccgtgccc
cggaaatcaaagctgcaagttcacaggaatgtgagggatgacgagggattcatcgtcaga
cactttgcaggagcggtgtgctatgagacgaccaagtttgtggagaagaacaatgatgca
ctgcacatgtccctggagtgcctagtgagtgagtctaaggaccggtttatccgggagctc
tttgagaactccaacaacaccaaggactcgaaacagaaggccggcaagctcagcttcatc
agcgtcggcaacaaattcaagacccagctgaacattctactggagaagcttcgcagcacg
ggctccagtttcatccgttgtatcaagcccaatctgaagatggtcagccaccagtttgaa
ggggcccagatcctctctcagttgcagtgctcaggaatggtgtccgtgctggacctgatg
cagggaggcttcccctccagagcgccattccatgagctctacaacatgtacaagcagtac
atgcctgccaagctgactcgcctggacccaagactcttctgcaaggctttattcaaagcg
ctgggactcaacgagaatgattacaagtttgggctgaccagagtgttcttcagacctggg
aagtttaaggagtttgatcagatcatgaagtcggacccagaccacctggcggagctggtg
aagaaggtcaaccagtggctcatctgcagccgctggaagaaagtccagtggtgttccctc
tctgtcatcaaactgaggaataagatgctctaccgtgccattgcctgcatcaagatgcag
aagacggtgcgcatgtggctgtgcaggaggaagcacaagccgcggatcgatgggctggtg
aaggtgcgtaacctgaagaacaggatggataagttcaacgaggtgatcgccggcctgaag
gaggggaagcaggagatgagcatgcagattcaggggctggacgatgccatcaacacaacc
atgctcaaaatcaagaccacagcaatgacccgcattgacatggaccatgagtaccaggcc
ctggtcaccaggtcagaggagctgctgacagccatgcagaacaagaagaaggaggaggaa
gagaaggagcgactgaagaagatccaggaggagatggcgagagagaagaagaggagggag
gaggaggagcagcgccgcaagcaggacaaagaggacaggcgtctgaaagcggagatggag
cagaagcggaaacacgaagaagaggagcggaagcagagagagaaagaggagaggaaactt
caggcagagatggatgttcagctggaggctgagcgggaggaggcggcggcgcgtcagaac
atcctggagcaggagaggcgcgacagggagctggccatgaggatcgcccagagcgaggct
gaactcatcccagaggacacccagaatgacgcaggcctgcgcagtaacggcacctcaggt
ggtccatcctccccagagagagctactggagctggtggatctcaaaagctcaagagcatg
tccatggaggaaatggccaaggaaatgtctgagcttctgtctagaggcccacaggttcag
gctaccaaagctgctgctgctggcaccaagaagtacgagctcagcaagtggaaatacgcc
gagctgagggacgccatcaacacatcctgtgacattgagttgctggctgcctgccgagaa
gagttccaccgccggctgaaggtctaccacgcctggaagtcaaagaacaagaagcgtggc
aacaaccccggagtcacagagcagagggcccccaaatcagtcactgactatgatctcgca
cctcgtgtgagacaagcaccccaggcgaactcagccccgcccatcccagccaggcaacat
gaggtggccatgaacaggcagcagcgctacttccgcattcccttcatccggcccggggac
cagtacaaggacccacagaacaaaaagaagggctggtggtacgcgcactttgatgggccc
tggatcgcaaggcagatggagctgcacccggacaagcagcccatcctgctggtggcaggg
aaagatgacatggagatgtgtgagctgagcctggaggagacaggcttgacaaggaagagg
ggagctgagatcctgccccggcagtttgaggagatctgggagcgctgcgggggcatccag
tacctccggagagccattgagaaaaaacaggcccgccccacctacgccacagccatgctg
aagacccttctcaagtaa
DBGET
integrated database retrieval system
