Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415030
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Entry
139415030 CDS
T10872
Name
(RefSeq) sorting nexin-14-like isoform X1
KO
K17926
sorting nexin-14
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139415030
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
139415030
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
betaPIX_CC
WHD_KicB
Motif
Other DBs
NCBI-GeneID:
139415030
NCBI-ProteinID:
XP_071018881
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Position
8:complement(17437215..17459414)
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AA seq
936 aa
AA seq
DB search
MECIRVYLESLKQGLQIDVLREVGRQYPVFCFLLVFMLSLTILLNRYLHILMVFWSFLAG
VITFYCSLGPESLLPNILYTIKPKNKQEQQELFPLGHSCAVCGKVKCKRHRPTLLLENYQ
PWLDLKVYSKVDASMSEVLELVLENFVYPWYRNITDDEACVDELRMTFRFFASVLVRRAQ
KVDVPSVISGKMMKAAMKHVEIIAKAKQKVKNTEGLQQAALVEYGPDLHFALHSRKDELR
YLRKVTKMLFAYLMPPKATDCRSLAVLMQEILVGSVFLPIMDFMADPDTVNHMVLIFVDD
TPSEPAMEPPSSLVPFLQKYADPRTKKTSVLKLELKEIREQQDLLFRFMNFLKQEGAVHV
LQFLLTVEEFNDKILCPELSEAELQRLHGEVQHVYETYCLEESIDKISFDRFIVEEIRNI
AEGPYEGVVKLQTMRCLFEAYEHVLSLLENVFTPMFCHSDGYFRYLLMGAVSPKRDSRMN
RNSLSVDDMRIVSKRGETFGISRIGSKIKGVFKSTTMEGAMLPYSMVDAEDEAVEEATMV
MEDDSPVEAASTPGVLRNLSAWSITIPYIDFYEDEVKKERVPVFCIDVERNDMKEVGHET
EAWSIFRRYMEFYVLENKLTEFHGSFADAQLPSKRIIGPKNYEFLSSKREEFEEYLQRLL
QHPELSNSQLLADFLSPHSMETQFMDKMMPDVNLGKIFRSVPGKIIKEKGQNLEPFIQSF
FNSCESPKVKSSRPELTTLSSTAEYNKLSNDLYKNNTNLFETLETHNRNYFMEMISVEGM
YDYMMFMGRVVFHMPDWLHHILSGGRILLKNTFEAYMDSYIQHKLEMILQEHSVVSLVTM
LRDAVFCENSEERTTGDKQRRAKKAFEEMMNYLPDFMEKCIGQEAKYEGIRLLFDGFQQP
LLNKQMTYVLMDIAVEELFPELGKKGQGEPSADSNQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtattcgagtttatctggagagcctgaagcaaggactgcaaattgatgtcttg
agggaagttggacgtcaatatcctgtcttttgctttcttctggttttcatgctgtcatta
actatacttcttaataggtatcttcacattctgatggtgttttggtccttcctggctgga
gtgattacgttctattgctccctcggtccagaatcactcctgcccaacatcctgtacacc
ataaagcccaagaacaaacaagagcaacaggagctgtttccattgggacacagctgtgca
gtgtgtgggaaagtaaagtgcaaacgtcacaggccaacattactcctagaaaactatcag
ccatggttggacttgaaagtctactctaaagtggatgcttccatgtctgaggtgctcgag
ttggttctagagaattttgtatatccctggtaccggaacatcacagatgatgaggcatgt
gtagatgaactgagaatgacctttcggttctttgcatctgtgttagttcgacgcgctcag
aaggttgatgtcccctcagttatttctggcaaaatgatgaaagcagccatgaagcacgtt
gaaataattgcaaaggccaaacaaaaagtgaagaacactgagggattgcagcaggctgct
ctggttgagtatggccctgacttacattttgccctgcatagtcgcaaagatgagctgcgt
tatctcaggaaggtgacaaagatgctatttgcctatctcatgcctcccaaagccactgac
tgcagatctctagctgtgctgatgcaagagatcctggtaggctctgtgttcctccccatc
atggacttcatggctgatcctgatactgtgaaccacatggtgctaatattcgttgatgac
actccatctgagccggccatggagccaccatctagcctggttccattcctgcagaaatac
gctgaccctcgtaccaagaagacatctgtgctgaagctggagctgaaggagattcgggag
cagcaggaccttctgttccgcttcatgaacttcctaaagcaggagggagccgtgcacgtg
ctccagttcttactcaccgtggaggagttcaatgataagatcctgtgtccagagctgagt
gaagctgagctgcagcgtctgcatggtgaggtgcagcatgtctacgagacctactgcttg
gaggagagtatcgacaagatcagttttgaccgcttcatcgttgaggaaatacgaaacatt
gcagaggggccgtacgagggagtggtgaagctgcagactatgcgctgcctgtttgaggcc
tacgagcatgtcctgtccctgctggagaatgtcttcacccccatgttctgccacagcgat
gggtatttcagatacctgctgatgggggcagtctctccaaaaagggactccagaatgaac
aggaatagtctgagtgtggatgatatgaggatcgtctcaaaacgaggggagacgtttggg
atcagccggatcggcagcaaaatcaaaggcgtcttcaagagcaccaccatggagggggcg
atgctaccgtactccatggtcgacgctgaagatgaagcggttgaggaagcgactatggtg
atggaggatgactcccctgtggaggcagctagtactccaggagtcctgaggaacttgtca
gcctggagcatcaccatcccctatattgacttctacgaagacgaggtgaagaaggagagg
gtccccgtgttctgcatcgacgtggaacgcaatgacatgaaggaagtgggacatgaaaca
gaggcctggtccatcttcagacgatacatggaattctacgttctagaaaataaactcaca
gagttccacggctcatttgcagatgcacagctcccttcgaaaagaattataggaccaaaa
aactatgagttcctatcatcaaagagggaagaatttgaggagtatttgcagagactgctg
cagcacccagagttgagtaacagtcagctgttggcagacttcctgtcacctcacagcatg
gagactcagttcatggacaagatgatgcctgatgtaaacctgggtaaaatattcaggtct
gtccctggaaaaattataaaagagaaaggacagaacctagagcctttcatccagtccttc
ttcaactcttgtgaatctcccaaagtcaaatccagcaggcctgagctgaccaccctcagc
tctactgctgagtacaacaagctctccaatgacctctacaaaaacaatactaatctgttt
gagaccctggagacacataaccggaactactttatggagatgatctcggtagaagggatg
tatgactacatgatgtttatgggtcgagtcgtgttccacatgccagactggttgcatcac
atcctgtcaggggggcggatcttgctcaagaacacattcgaggcctacatggatagctac
attcaacacaaactagagatgatcttgcaggagcacagtgtggtgtctctcgtcaccatg
ctcagagatgctgtgttctgcgagaacagtgaggaacgcaccacaggagacaagcagaga
agagccaagaaggcatttgaagagatgatgaattatctgccagactttatggaaaagtgc
attggacaggaggccaagtacgagggcattcgacttctctttgacggcttccagcagcca
cttctcaacaagcagatgacgtacgttctgatggatattgctgtcgaagaactgtttcca
gaactcggcaagaagggacaaggggagccgtcggcagacagtaaccagtga
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