Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415085
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Entry
139415085 CDS
T10872
Name
(RefSeq) syntaxin-7-like
KO
K08488
syntaxin 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04140
Autophagy - animal
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139415085
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139415085
04140 Autophagy - animal
139415085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139415085
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139415085
Membrane trafficking [BR:
ocla04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
139415085
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139415085
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
DUF3040
TOP_N
DUF4191
Synaptobrevin
HsbA
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
139415085
NCBI-ProteinID:
XP_071018965
LinkDB
All DBs
Position
8:complement(20193010..20204147)
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AA seq
260 aa
AA seq
DB search
MAYQYGKVQDPNVLTQTIISNIQKIAQQTSEIQSIVDKLGTPQDTTELRQQLQQKQQNVN
HLAKETDRSVKQFGSLPVTTEQRQRKIQKDRFINDFSNALANFQKTQRQAAQKEKAFVAR
VRAESRVSGGYPDDSFGGNGNVFESGGQVQSQSQEVAITEEDLQLIQERETSIRQLESDI
TDINEIFKDLGMMVHEQGDVIDSIEANVETADLHVQNATQQLAQAADYQRKSRKKICILI
VVLAVLAVVIGLIIWASVKG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccagtacggaaaagtgcaggacccaaatgtgcttactcagacgataatctcc
aacattcaaaagatcgcacaacaaacatctgaaatacagagtattgtggataagttggga
accccacaagatacaactgagctcagacagcagctgcagcagaaacaacagaatgtcaac
caccttgccaaagaaacagaccgaagtgtgaagcaatttggctctttgcctgtcacaact
gaacagcgccagagaaagatccagaaagaccgatttatcaatgacttctccaatgcactg
gccaatttccagaagacacagaggcaggctgctcagaaagagaaggcgtttgttgccaga
gtccgtgctgagtccagagtgtcgggtggctatcctgacgacagctttggaggaaatgga
aacgtctttgaaagtggggggcaggtccagtcacagtcccaggaggtggccatcactgaa
gaggacctgcagctcatccaggagagagagacttccatcagacagctagagtctgatatt
acagatataaatgaaatatttaaggacttgggaatgatggtccatgagcaaggggatgtg
atcgacagtatagaggccaatgtcgaaactgctgaccttcatgttcagaatgccacccag
cagttagcacaggctgcagactatcagcgcaaatctaggaagaagatctgcattctcatt
gtcgttctggcggttcttgctgttgtcattggtttaatcatctgggcatcagtcaaagga
tga
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