Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415100
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Entry
139415100 CDS
T10872
Name
(RefSeq) gap junction alpha-1 protein
KO
K07372
gap junction alpha-1 protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
139415100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139415100
Transporters [BR:
ocla02000
]
Other transporters
Pores ion channels [TC:
1
]
139415100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
Connexin43
Connexin40_C
Ammonium_transp
Motif
Other DBs
NCBI-GeneID:
139415100
NCBI-ProteinID:
XP_071019015
LinkDB
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Position
8:complement(21760193..21765922)
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AA seq
383 aa
AA seq
DB search
MGDWSALGRLLDKVQAYSTAGGKVWLSVLFIFRILVLGTAVESAWGDEQSAFKCNTQQPG
CENVCYDKSFPISHVRFWVLQIIFVSTPTLLYLAHVFYLLRIEQKINRKEEGLKTIQNDG
GDVDVPLKKIELKKLKHGLEEHGKVKMKGALLRTYIFSIFFKSIFEVGFLVIQWYIYGFS
LAAVYTCERSPCPHRVDCFLSRPTEKTVFIIFMLVVSLVSLLLNVIELFYVMFKRIKDRV
KGKQPPIHYPGTGTLSPTPKDLSTTKYAYYNGCSSPTAPLSPMSPPGYKLATGERTNSVR
NYNKQANEQNWANYSTEQNRLGQNGSTISNSHAQAFDFPDDTQESKKLTPGHELQPLALM
DPRPCSRASSRMSSRPRPDDLDV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactggagtgctttggggaggctcctggacaaggtacaggcttactccacggct
ggagggaaggtgtggctctctgtcctcttcatcttcaggatcctggtgttgggaacggct
gtggagtctgcctggggggacgagcagtccgccttcaagtgcaacacccagcaacctggt
tgtgagaatgtgtgttatgacaaatcttttcctatatcacatgtacggttctgggtgcta
cagattatctttgtctcgacgccgactcttctctaccttgcccatgtgttctacctgttg
cgaatagagcagaagattaaccgcaaagaggaaggactgaaaaccatccagaacgacgga
ggcgacgtggacgtacctctaaagaagattgagttaaaaaagctcaagcatgggctggag
gagcatgggaaggttaagatgaagggagccctcttgagaacctacatattcagcattttt
ttcaagtccatttttgaggtgggcttcctggtcatacagtggtacatttacggcttcagc
ttggctgctgtctacacctgtgagaggtccccctgcccccacagagtagattgtttcctc
tccagacctactgaaaaaaccgtcttcatcatcttcatgctggtggtctctctggtctcc
ctgcttctgaacgtcattgagctcttctacgtgatgttcaagaggatcaaggaccgcgtg
aaggggaaacaacctcccatccactaccctggcactgggacgttaagccccactcccaag
gatctgtccaccactaagtatgcctactataatggctgttcctctcccactgcccccctg
tcccccatgtcacccccggggtacaagctggccactggggagagaaccaactccgttcgc
aactacaataagcaagccaatgagcaaaactgggccaactatagcacggagcagaaccgc
ctgggccagaatggcagcaccatctccaactcccatgcacaggcctttgactttcctgac
gacacccaggagagtaagaaactgaccccagggcacgagctgcagccgttggccttgatg
gaccccaggccctgcagtcgggccagcagtcgcatgagcagtcggccgaggccagatgat
ctagatgtctag
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