Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415145
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Entry
139415145 CDS
T10872
Name
(RefSeq) transcription factor HIVEP2a
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139415145
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139415145
NCBI-ProteinID:
XP_071019108
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Position
8:complement(24102949..24114370)
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AA seq
2375 aa
AA seq
DB search
MEPRESAAGPKCTKDPREKLQRKWVSEPSAGTKRSTFADPEEKRNSHREILQSGASGSNI
TGSARKYGSGKLLSTAMGQSSQDSQYAQAFPRTYSYQLPQPYPQQPMQERFLSGAKPQPG
LEAHAWPFAGQLPSDDIYPGHSRAHGVFPRQKSPSLPSSFGQYSQSGPEPPEEGYKKEQK
PKKPGKYICHYCGRACAKPSVLKKHIRSHTGERPYPCVPCGFSFKTKSNLYKHRKSHAHA
IKAGLVPFSELAVSRTDMDQASSVGETEVHSDGEQSTDTDEETAEASMLMDKGSPIPQIS
FEMDKSTMEKGREPAYADSAEELAMASMKVPILIVPKQGVPPTALECPPFTDLKASHISS
QVGRVDDSPTIKQRLALRLTEKKGSQDSDQQSQQSLNLLSPHSKGSTDSGYFSRSESAEQ
QISPPNTNAKSYEEIMFGRTWYYKPNSARSRQSIAVGMATVGQDTNIVMGKISEDHIFFR
NDSGEVQLLAGVDPKQYPTGPCQSNTGLLETPSDSGTLIRSNSMPTSSPTNLNVPPGIRV
SHSFDEMMTSDDVFYPGAAGLRRLRRQAAFEHSAHEGHGDYETYGHVPKNAAPSVALKLG
ERSPVVPEHTAYSPYGTKGGMTEIATRKRRKEKSVGDEEDGPVQYDSSCSGSVDMVRDYD
SKQGSQEGSRGTPTGKGSMGSMYSAHSQSDSFETCCSSMCSEDVVLVPDSDRKAAGNVIS
VIQHTNSLSRPNSFEKSESFEHPAYLQDKPSSQYSEQSDTEHIEDVQSPEFILRSESMEL
QQQSNSDLVSSNQPCHMPPKLVRQPNIQVPEIRVTEEPDKPEKEPDVPTKEPEKHVEEFQ
WPQRSETLSQLPAEKLPPKKKRLRLADLEHSSGESSFESCTSLSRSPSQESNLSHSSSFS
MSFDREESLKSVSPSKQEDFGKQSEYSGNSLTIPGHHQQREMRRSSSEQAPSALPTEIPE
IRSKSFDYGSLSTSSRQGEVYSSASGMKDRRRGYLVRQASLSVYPETAVHEHGGLEITVK
QEHSDHGPSSWQSPPSSQSSLGASASEVARPKRGSHHHLLQQSISEDSQDDSPLFQKSSR
LPSQQSSEGEHPGHELMSKETMQYSSLQNSLASLPFVPCQPGLFWHPESTQRHKQHLAFQ
PHQLQKLHIRQPSLPHMIQKSNPPLNQLQQIQEQCDAKADGAISQNYQYPSRASPQAQHY
GSLLSKVALTESTVLLQQVQPIFATQNAGSQSSLPGMLVPVRIQTQVPSYGSVMYTSVSQ
LLANHGQSTYSARVICSESVSSSSPTGCTVSKQGVGFNLSQILGQSEGALRYPLWNIPDL
NTEHGRLNTGIPLSLTSGTISTTDASSSIGGSKRMLSPASSLELFIETKQQKRVKEEKMY
GQIVKELSAVELSASKDSGKLSKCAPLKSEGSMDDQERMSSSPPADFPSTKIPVRSNAPH
IPDVPPADSFTPPLQIVTDFPGGRESPEELDVDDSTPEASCSPQFMVSSSDTPEEAKTLM
GSKIPVNMLVQLAANQSGGAAGSTLMLTDLADVQQFFQFPSLRTTTSVSWCFLNYTKPNN
AQTTPLTSVYGSWCVSSYNPNPLSLSTKATLALLCSKQRKNTETYTMAAMYQPRTGKLVS
SLAWKQKFEQMKPELMQLDVSKYGKKIKGLSSRDRVKEDHGEKEASSKQAEPTRIKIFEG
GYKSNEDYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHTDVRPYVCKFCNFAFKTKG
NLTKHMKSKAHMKKCLELGVSVTSVEDPDAEEADNGEDGQRESGKMSGIMADHQFSDADD
SDGGEDDGDEVDDDEDDEDDYDGDSTPKTRSRSTSPQPYGIPSLSITAVAASQSACSSDL
LCHGPKPPIFSYFTSLPSIQITQLMVPSERAGQGQMAEYQRLLQGALGEDYKNRLDIPSS
MDKDFGLSTDHSSSSFDLSPSRLSSPGLGSSPLREPSPTTSSRKYLSPRRDLSPRGRLSP
HREVSPLRHISPKRDISFRRDLSPRRDLSARGHLSPLSHAGRPTSPGRDLAGRRELSPRS
HHRGMIRPVSPRRGMHHHSAPWSLSQHLDSEMVSLGQRSRSHSEMETEQNKGSPPHSSQE
SPLPHQGLFSHLPLHSQQQVRTSFPMIPIGGIQMVHSVPTSVTGLTHPARLPLQKSTSEE
SSTSEVSFHLVEGGGGSRGSTGSSDSPQRQERMVLSSFSSRGTPVPSPGPSLPWSGSRQD
SADMSDSKDIKQQEESIQTCTNAIASLRIATEHDTLEKGMLVCSSDAHQRHPPPLPHSSH
SPYPSPQERSSSIIQHFSGLEVRQSPDGHSASPLPLHSSSSSETSLPATSKGPTGSTAGP
GHCAKERSPGQQSPGERPESTKRGKNILKDATENR
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgtgaatctgctgctggaccaaaatgcaccaaggatccccgggagaagcta
caaaggaagtgggtctctgagccctcagctggcacaaaaagaagcacttttgctgacccg
gaggaaaagaggaactcgcatcgcgaaatccttcaaagtggtgccagtggcagcaatatt
actggctcagcacgaaagtatggctctgggaagctgctatcaactgcaatgggtcagtca
tctcaagatagtcagtacgcacaggctttccctcgtacttactcctaccagctaccacaa
ccgtacccacaacagcccatgcaagagcgcttcctgtccggagccaagccacagcccggt
ctggaggcccatgcctggcccttcgctggacagctcccatccgacgacatatatcctgga
cactcccgtgcccatggagttttccctcgtcagaaatctcccagtttacccagttctttt
ggccagtattcccagtcagggccggagccaccagaagagggatacaagaaggagcagaaa
cccaagaagccagggaagtatatctgccactactgtggaagggcttgtgctaaacccagc
gtgctgaagaagcacattcgttcacacactggggaacgcccctacccttgtgtcccctgt
gggttctcatttaaaaccaagagtaatttgtacaaacacaggaaatctcatgcccatgcc
atcaaagcaggactagtcccattctccgaactggcagtttcacgcacagacatggatcag
gcatcctcagtgggagagacggaagtacactcagacggtgaacagagcacagacaccgac
gaggaaactgcagaggcctccatgttaatggacaaaggcagccctattccccagatatca
tttgagatggacaaaagcacaatggagaagggtagggagccggcatatgctgactcagct
gaggagctagctatggcttccatgaaagtgcctatcctaattgtcccaaaacaaggggtc
ccaccaacagcattggagtgccccccattcacggacctcaaggcttctcacatcagctcc
caggttggccgcgtggatgactctcccactatcaaacagagactggctctgagactgaca
gagaagaagggatcacaggactcagaccagcagtcccagcagtccctgaaccttctgagt
ccacacagcaaaggcagcacagactcgggctacttctcccgttcagagagtgcagagcaa
cagatcagccctcccaacacaaacgcaaagtcctatgaggagatcatgtttggtcggact
tggtattacaaacctaactctgctagatctagacaatccattgcagtaggcatggccact
gttggccaagacactaacatagtaatggggaagatatctgaggatcatatttttttccga
aatgatagcggtgaagtgcaactattagcaggtgttgaccctaagcagtatcccacaggc
ccttgccaaagcaacacaggtctactagagactccttctgattcagggacactcattagg
agtaactcaatgccaacatcctccccgaccaacctcaacgtcccaccggggataagagtg
agccactccttcgacgagatgatgacctctgatgatgtcttctacccgggtgctgccggt
ctgaggaggcttaggagacaggcagcttttgagcattcagcacatgaagggcatggcgac
tatgaaacctatggacacgttcccaagaacgcagccccatccgtggcattaaagctaggg
gagcgcagtcctgtggtgccagagcatacagcatacagcccatatggtactaaaggggga
atgacagagattgccactcgtaaacgcaggaaggaaaagagtgtaggagatgaggaggat
ggccctgtccagtacgacagtagttgtagtggctcagtagatatggtcagagattatgat
tcaaaacaaggtagtcaagagggttcaagggggacacctactggaaagggatccatggga
tctatgtacagtgcacatagccaatcagacagttttgaaacatgctgtagtagcatgtgc
tcagaggatgtagtgctagtcccagactctgacagaaaggcagctggcaatgttatatct
gtcattcagcacaccaactcactcagtaggccaaactcctttgagaagtcagagtccttc
gagcacccagcctacctgcaagataaaccctccagccaatactcagagcagtcagataca
gagcacatagaggatgtgcagagcccagagtttatcctgaggtctgagagcatggagctg
cagcagcaaagcaacagtgatttagtttcatccaaccagccctgtcacatgccccccaaa
ctggtacgtcagcctaacatccaagtgcctgaaatcagggtgacagaggagccagacaaa
ccagagaaagagcctgatgtaccgaccaaggagccggagaagcacgttgaagagttccag
tggccccagaggagtgagacactgtcccagctccctgcggagaagctgcctcctaagaag
aagcgtctgcgtctggcagacctggagcactcctctggggagtccagctttgagtcttgc
accagcctgtccaggagccccagccaggagagcaacctgtcgcacagctccagcttctct
atgtcctttgacagggaagagagcctaaagtctgtgtcaccgtccaagcaggaggacttt
ggcaagcagtctgagtacagcggaaactctctcactatccccggccatcaccagcagagg
gagatgcgacgctcctcatcagaacaggctcccagcgctctgcccaccgagatcccagag
atccgtagcaagtccttcgactatggtagcctctcaacatcatccagacagggagaggtt
tactccagtgcatcaggcatgaaagatcggagacggggctacctagtaaggcaggcatcc
ctcagcgtttaccctgagactgcggtgcatgagcatggtggtctcgaaattactgtcaag
caagagcactcggaccatggaccctcatcttggcagagccccccatcctctcaaagttct
ctcggtgcatcagccagcgaagtagcaagacccaagagagggtcacatcatcatcttctg
caacagagcattagtgaggacagccaggacgactcaccactgttccagaagtcatctcgt
ctgccaagtcaacagtcatctgagggagagcatccaggtcacgagctcatgagcaaggaa
acgatgcaatactcctcactccagaacagcttggcttcactgcctttcgtgccatgtcag
ccgggtctgttctggcatcccgagtccacacagagacacaagcagcatctggctttccag
ccacaccagttacagaaactacatatcagacagcctagtctaccacacatgatccagaaa
tccaacccacctcttaatcagctacagcagattcaggagcaatgcgatgcaaaagctgac
ggtgctatcagtcagaactatcagtatccctccagagcctccccgcaggcccagcattac
ggatctctactgtctaaagtggccctcaccgagagcacggtgctcctgcaacaggtccag
ccaatcttcgccactcagaatgcaggttcacagtcatctctcccaggtatgctagtcccc
gttaggatacagactcaagtgccatcttacggaagtgttatgtacacaagtgtttcacaa
ctcttagctaatcatggccagagcacttattcagcaagagtcatatgctcagagagtgta
tcatctagttcacccacaggttgcactgtttcaaagcaaggcgttggcttcaatttatct
cagatccttggtcagtctgagggagctctacgttatccactgtggaatattccagatctg
aacactgaacacgggagactgaacacgggaattccgctgtcgttgacatcaggaaccatc
tccaccacggatgcgtcctccagcattgggggaagcaagcggatgctatcacccgccagt
agcctggaactctttatagagaccaaacagcagaaacgggtcaaggaggagaagatgtac
ggtcagattgtaaaggagctgagcgctgtcgagctgagtgcttcgaaagacagcggcaag
ttatcaaagtgtgcccctctgaagagcgagggttcaatggacgatcaggagaggatgtcc
tcctccccaccagcagacttcccctccaccaaaatcccagtgcgttccaacgcacctcac
atacctgatgtgccaccagctgacagcttcactccccctctgcaaatcgtgacggacttc
cctggtggcagagagtccccagaggagctggacgtagatgactccaccccagaggctagc
tgcagcccacagttcatggtctcctccagtgacactccagaggaagccaagacactcatg
ggcagcaagatacctgtcaacatgctggtgcagctggctgccaatcagagtgggggtgct
gccggaagcactctaatgctcacagatctggccgacgttcagcagttctttcagttcccc
agtcttcgcacgacaaccagtgtcagctggtgcttcctgaattacaccaagccaaacaac
gctcagacgactcccctgacttctgtctatggctcctggtgcgtcagctcctacaacccc
aaccctctcagcctcagcaccaaggctactctggccctgctctgctccaagcagaggaag
aacacagaaacctacacgatggctgctatgtatcaacccaggactggaaaacttgtgtcc
tctcttgcttggaagcagaagtttgaacagatgaagccagagctcatgcagctagatgtg
agcaaatatgggaagaaaatcaaggggctgagctccagggatcgagtcaaggaggaccac
ggagagaaggaggcctcctcaaagcaggctgagcccactcgcatcaaaatctttgaagga
gggtacaaatccaatgaagactatgtttacgtgcggggaagaggaagagggaagtacatc
tgtgaagagtgtggaattcgttgtaagaagccaagcatgctgaagaaacatatccgcaca
cacaccgatgtccggccgtatgtctgcaagttctgcaactttgcttttaaaaccaaagga
aacctgacaaaacacatgaagtcgaaagcccacatgaagaagtgcttggaactcggggtg
tcagtgacatctgtggaggatcctgacgccgaggaagctgacaatggcgaggatggccag
agggagtctgggaagatgtcaggcattatggcggaccaccagttctcagacgctgatgat
tctgatggtggcgaggatgacggggatgaggtggatgatgatgaagacgatgaagacgat
tacgatggcgactccacgccgaaaacacgctccagaagcactagccctcagccctatggc
ataccgtctctctccatcacagctgtggcggcctctcagagtgcctgctcctcagacctg
ctgtgccacggccccaaacctcccatcttcagctacttcaccagcctgcccagcatccag
atcacccagctcatggtgcctagcgagcgtgcaggccagggccagatggcagagtatcag
cgtctgctgcagggcgccctgggcgaggactataagaacaggctagacatacccagctcc
atggacaaggactttggcctgtccacagatcacagctcctcctcctttgacctgtccccg
tctcgcctctcctctccaggcctggggtcctcccctctccgagagccctcccccaccacc
tcctcacgcaagtacctctccccccgacgggacctgtccccccgtggccgcctgtcaccc
cacagagaggtgtcccctctccggcacatctcccccaagagagacatctccttcaggagg
gacctctcgcctcggagggacctgtccgccagaggccacctctcgcccctgtcccacgcc
ggacgccccacgtcaccgggcagggaccttgcgggcaggagggagctgtctccgcgcagt
caccaccggggcatgatcagacctgtttcccccaggaggggaatgcaccatcacagtgcc
ccttggagtctaagtcagcacctagactcagagatggtgtcactgggccagcgcagtagg
agccactcagagatggagacagagcagaataagggttcccctccccacagcagccaggag
tcccctctgccccaccagggcctgttcagccacctccccctgcactcccagcaacaggtc
cgcacctccttccccatgatccccatcggcggcatccagatggtgcactccgtgcccacc
tcagtcaccggcctgacccatcccgcccgcctccccctgcagaagagcacgtccgaggag
tccagcaccagcgaggtctccttccacctggtcgagggaggaggagggtccaggggttcc
accgggtcgtccgactcaccccagcgccaggagaggatggtgttatcatccttttcctct
cgggggacgccggtcccctcccctggcccgtccttaccctggtcaggaagtcgccaggac
agcgcagacatgtcagacagcaaggacattaagcagcaggaggaaagcatacagacttgt
accaatgctatcgcctcgctccgcatcgctacagaacatgacactctggagaagggcatg
ttggtgtgctcttcagacgcccatcagagacacccccccccactgcctcactcctctcac
tccccttaccccagccctcaggagagaagctccagcatcattcagcactttagtggccta
gaggttaggcagtccccggacggccactctgcctcccctctccccctacactccagctcc
agctcggagacctccctgccagccacatcaaagggcccgacgggttccacggcaggccca
ggccactgtgccaaggagaggtcgccaggtcaacaaagccctggggaaagaccagaaagc
acaaagagaggcaaaaatatattaaaggatgccaccgagaacaggtga
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