Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415184
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Entry
139415184 CDS
T10872
Name
(RefSeq) protein dispatched homolog 1-like
KO
K24680
protein dispatched 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
139415184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139415184
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
Patched domain-containing proteins
139415184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMPL
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
139415184
NCBI-ProteinID:
XP_071019180
LinkDB
All DBs
Position
8:complement(26520815..26594356)
Genome browser
AA seq
1566 aa
AA seq
DB search
MALSNANGDLLFLSNASMPPSVTTMASGTSSPASSASLSNTEGGDGSVVSTPRTQQRHRH
QPRPTPPHKEPQQRSRVSLDGGAVKQNGSLRAPSSSTSSSHLTDSQRLAKLLPSTLSTTT
SPSPPQPPPLSPPPPCCHRCPFHPPLCCHGNQQECHIFQTHAPALQLHPGSCSCCLQASP
PSLCLHHRWQEHLQNQPNVAGLSPARPFRFPKSYAELIADWPVVVLGVCTVLIVVCALVG
ILVPDLPDFSDPLLGFEPRGTAIGQRLVTWNNMVKNTGYKATLANYPFKYADEQAKSHQE
DRWAEDHFDRDKRQADWDFSKDSFFCDVPGDRYSRLVFTSAEGKNLWNIQAIKSMCNLDN
TRVRSHPQYWSLCQRTTDASCCPSWTLGNYVAILTNKSSCQKITERDVSHTLKILRSCAK
YYHNGTLGPDCWDMTTRRKDQSKCTNVPRKCTKYNAIYQILHFLVDKDFLSPKNTDYLIP
TLKHSMLFSPTEKGETMMNIYLDNFENWNSSDGVTTITGIEFGIKHNLFQDYLLTDTVYP
AIAIVIVLVVMCVYTRSVFITLMTMIAIISSLIVSYFLYRMVFDFEFFPFMNLTALIILV
GIGADDAFVLCDVWNYTKFDKPNAELSETVSITLQHAALSMFVTSFTTAAAFYANYVSNI
TAIRCFGVYAGTAILVNYILMVTWLPAVVVLHERYLPNIFTCSKPPHQQTGLCTRTLWAN
LCQKANKCLFTISEASRIFFEKVLPCIVIKLRYLWLFCFLAFTVGGAYVVCVNPKMKLPS
LELSEFKVFRSSHPFERYDAEYKKLFMFERVHHGEDLHMPITIIWGVTPVDNGDPLNPKN
KGKLMLDNTFNIASPASQLWILNFCQKLRNQSFVFQSEEQDFTSCFIETFKQWMENRDCE
EASVYPCCSQSTFPYKQDVFELCIKRAIMELDRSTSFHLDSKTPGPRFDINDTIRAIVLE
FKSTYLFTLAYEKMHQFYHEVDTWIQEELKNAPDGLKYGWFVSNLEFYDLQDSLSDGTLI
AMALSVVVAFVVMLLTTWNIIISLYAILSIAGTIFVTVGSLVLLGWELNVLESVTISVAV
GLSVDFAVHYGVAYRLAPEPDREGKVVFSLGRMGSAIAMAALTTFVAGAMMMPSTVLAYT
QLGTFMMLIMCISWAFATFFFQCMCRCLGPQGTCGQIPLPKRFQCQAFKEGTTNVPSPQG
KHGTKYQLDSRGGEVEHEHYELEPLASNQKNEEKPAEEQETCTQLYNGIAPHSAPCTHIP
FKSKAESGRGPCSENGLGILATDATPRCQYSHNTTCTCGDPPHQSMGMQWTPHPCTQATQ
ESPFPLTGSHANKGQTLLSTLDAVYKPIGCRMHYVHCPPAHFHHCTPGRVPRQGPHTCHL
RNYCVHTVPLTGGLPRDQHSAPDPAGLEEVHRTGASSGPSGSPTTPAQTHRPPASALGCT
LAHIHTGCCIANHETQRAEEKTVNAPRDQSVDNFVSTTMQKDACHKMPGNKKLETSTTPV
TWEESVKTCKQNPKKERASSASPKKLYCFNRTLKVKCNSVEFNAPKADANVPALAINSKP
ASESLC
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggccctgagcaacgccaacggtgacctcctcttcctcagcaatgccagcatgccaccc
agcgttaccacgatggccagtggcactagcagcccagcttccagtgccagcctcagcaac
acggaaggaggggacggcagcgttgtttccacacctagaacacagcagaggcataggcac
caaccaaggccaacgcctccacacaaggagccccagcagagatccagagtgagtctggac
gggggcgctgtcaagcagaacggctcccttagggccccttcctcgtccacctcctcttca
cacctcacagactctcaaaggttggccaagctcctgccctccacactttccaccaccacc
tccccctcgcctcctcagcctcctccgctgtctccacctcccccgtgctgccaccgctgc
ccattccatccccccttgtgctgccacggcaaccagcaggagtgccacatcttccagacc
catgctcccgccctgcaactgcacccgggctcctgctcctgctgcctgcaggcctcccct
ccatccctctgtttacaccaccgctggcaggagcacctccagaaccagcccaatgtggcc
ggcctcagccctgcaaggccttttcggttccccaaaagctatgcagagctgattgctgat
tggccagtggtggtcctgggggtgtgtacagtcctcatcgtggtgtgtgccctggtgggt
atcctggtgccagacctgccagacttctcagaccctttactgggatttgagccacgaggc
acagccataggccagcgactagtcacgtggaacaacatggtgaaaaacacagggtacaaa
gcaaccctggctaactacccattcaagtatgcggatgagcaggcgaaaagtcaccaagag
gacaggtgggctgaagatcactttgacagagataaaagacaagctgactgggacttcagt
aaagacagtttcttctgtgatgtcccaggtgacagatactctagattagtattcacatct
gcagaggggaagaacctgtggaacatacaagcaattaaatctatgtgcaatttggacaat
acacgggtgcgctcccaccctcagtactggagcctgtgccagcgcaccactgacgcctcc
tgctgccccagctggaccctgggaaactacgttgccatcctcaccaacaagtcctcctgc
cagaagatcacagagcgcgacgtgtcacacaccctcaagatcctgcgctcctgtgccaag
tactaccacaacggaaccctgggtcccgactgctgggacatgaccactcgccggaaggac
cagtctaagtgcaccaacgtcccccgcaagtgcaccaagtacaacgccatctaccagatc
ctccatttcctggtggacaaagacttcctgagcccaaagaacacagactaccttatcccc
acccttaaacacagcatgttgttttccccgacagagaaaggggagaccatgatgaacatt
tacctggacaactttgagaactggaactcctcggacggcgtcaccaccatcacggggata
gagttcggtatcaaacacaatctgttccaggactacctactgacggataccgtgtatcca
gccatagccatagtaattgtgctggttgtgatgtgtgtgtacacccgctctgtgttcatc
accctgatgaccatgattgccatcatcagctccctaatcgtgtcctacttcctgtaccgc
atggtgttcgactttgagttcttccccttcatgaacctcacggccctcatcatcctggtg
ggcatcggggcagacgatgcctttgtcctctgtgacgtgtggaactacaccaagttcgac
aagcccaacgctgagctgtcggagacagtgagcatcactctgcagcacgccgccctttcc
atgttcgtcaccagctttaccacggccgccgccttttatgccaactacgttagcaacatc
accgccatccgctgtttcggcgtctacgccggaacggccatcttggttaactacatactg
atggtgacctggctgccagccgtggtggtgctccatgagcgttacctgcccaacatcttc
acctgctctaaacctccccaccagcagacagggctttgcacccgcaccctctgggccaat
ctgtgccagaaagcaaacaagtgcctgttcaccatctctgaggcttccaggatcttcttt
gagaaggtgctgccgtgcatcgtgatcaaactgcgttacctctggcttttctgtttcctg
gccttcacagtgggaggggcgtacgtggtgtgtgtcaaccccaagatgaagctaccctct
ctggagctgtctgagttcaaagtgttccgatcctcccacccgtttgagcgttacgacgct
gagtacaagaaactgttcatgttcgagagggtccaccatggggaggacctgcacatgccc
atcaccatcatctggggggtcacccccgtggacaacggggaccccctcaaccccaagaac
aaaggcaagctgatgctggacaacactttcaacatcgccagcccggcctcccagctgtgg
attctcaacttctgccagaagctgaggaaccagagcttcgtgttccagtcggaggagcag
gacttcaccagctgcttcatcgagaccttcaagcagtggatggagaaccgggactgtgaa
gaggcctctgtctacccctgctgcagccagtctaccttcccctacaagcaggatgtcttt
gagctatgcatcaagagagccatcatggagctggaccgcagcaccagcttccacctggac
agtaagacccccggtcctcgcttcgacataaacgacaccatccgggccatcgtcctggag
ttcaagagcacctacttgttcacactggcctatgagaagatgcaccagttctaccacgag
gtggacacctggattcaggaggagctgaagaatgccccagacgggctgaaatacggctgg
ttcgtcagcaacctggagttctatgacctgcaggacagcctatcagacggcacgctcatc
gccatggcgttgtccgtggtggtggccttcgtggtcatgctcctcaccacctggaacatc
atcatcagcctctacgccatcctctccatcgcggggaccatcttcgtcacagtgggctcg
ctggtgctcctgggctgggagctcaacgtgctggagtcggtcaccatctcggtggcagtg
ggtctgtcggtggacttcgccgtgcactacggagtcgcctatcgccttgcccccgagcct
gaccgcgaggggaaggtagtcttctcccttggccggatgggttctgctatcgccatggcg
gcgctcaccacctttgttgccggggcgatgatgatgccgtccacggtgctggcctatacc
cagctgggcaccttcatgatgctcatcatgtgcatcagttgggcctttgccacattcttc
ttccagtgcatgtgccgttgcctgggcccccagggcacctgcggacagatccccctgccc
aagaggtttcagtgccaggctttcaaagagggcaccaccaacgtcccctcgccccagggc
aagcatggcaccaagtaccaactggacagtcgaggaggagaggtggagcatgagcattac
gagctggaaccgttagcctcgaaccaaaagaacgaggagaaacctgcagaggaacaggag
acgtgcacccagctctataatggaatagccccccactctgccccctgcacacacatcccc
tttaagagcaaggcagagtctggcagaggtccctgctctgaaaatggactgggcatactg
gcgactgatgccacacccagatgccagtactcccataacacaacctgcacatgtggagat
ccccctcaccagtctatgggtatgcagtggaccccccacccatgtactcaagccacccag
gagtccccattccccctcacaggcagccatgccaacaaaggccagaccctcctttccact
ctggacgcagtctacaaaccaataggttgccgtatgcactatgtccactgtcccccagcc
catttccaccactgcaccccgggcagggtgcccagacagggccctcacacctgccacctc
agaaactactgtgttcacactgtccccctcacaggtggcctccccagggaccaacactct
gccccagacccagctgggctggaggaagtacaccggactggagcatcctctggccctagt
ggcagccccaccaccccagcccagactcacaggcctcctgcctccgctctgggctgcaca
ttagctcacatacacacagggtgctgcatagccaatcatgaaacacagagggcggaagag
aaaacggtaaacgctccaagggatcagagcgtggataattttgtgtccactacgatgcaa
aaggacgcttgtcataagatgcctggcaacaagaagcttgaaaccagtactactcccgtc
acatgggaagaaagtgtcaaaacgtgcaaacagaaccccaaaaaagagagggcatcctca
gcctctcccaagaaactctactgttttaacaggactttaaaagtaaagtgcaattctgtc
gagtttaacgcgccaaaagctgatgccaatgtgcctgctcttgcaataaattcaaaaccc
gcatctgaaagtttatgttga
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