Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415288
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Entry
139415288 CDS
T10872
Name
(RefSeq) syntaxin-binding protein 6-like
KO
K08519
syntaxin-binding protein 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139415288
Membrane trafficking [BR:
ocla04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
139415288
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec3-PIP2_bind
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
139415288
NCBI-ProteinID:
XP_071019409
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All DBs
Position
8:32305975..32313224
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AA seq
324 aa
AA seq
DB search
MNIQSAINRAVFAPRDERMLVAVEVKRRKRKRVPFLPTGGKGEYMTYICLSVTNKRPAQL
LITKVKQFGGSAPFTRRSQWAVEQLRQVNGINPNKDCPEFDLVFDNAFDQWVASSAPEKC
IFIQIMYHACQTYWEGKEGVPGSPAGDQQKGQRGQGGQGSPGAQGGQGSPGAQGGQGSPG
AQGGQGSPGAQVGQIGGPVAQARRKSTVGPRPHHTEFVNCQSKLTGDACKMNLVLYRCKV
FFNRMKKVMVSNQSRSQAGAGPRAGPSGQRPPGGSMGSVVQRASQALQERGERLGRAEDK
TVDLMHKAQQFADTAHKLALKYSN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccagtcagctatcaacagggcggtgtttgctccccgggatgagaggatgcta
gtggctgtggaggtgaagaggagaaaaaggaaaagggtcccctttctacccactggaggc
aagggagaatacatgacatacatctgtttgtcagtgaccaataagaggccagctcagctc
ctcatcaccaaagtcaagcagtttgggggctccgcccccttcaccagaaggtcacagtgg
gccgtggagcagcttcgccaggtcaacggcatcaaccccaacaaggactgcccagagttt
gacctggtgttcgacaacgcctttgaccaatgggtggccagctcagcgccagagaagtgc
atcttcatccagatcatgtaccacgcctgtcagacctattgggaaggcaaggagggggtc
cctggtagcccagccggggaccagcagaaggggcaaagaggtcaagggggccagggtagc
ccaggggcccaagggggccagggtagcccaggggcccaagggggccagggtagcccaggg
gcccaagggggccagggtagcccaggggcccaagtgggccagataggaggaccagtggcc
caggctagacggaagagcaccgtgggtcccaggccccatcatactgagtttgtcaactgt
cagtccaaactcacaggagatgcctgcaaaatgaatctggtcctgtaccgttgcaaggtc
tttttcaatcgcatgaagaaggtgatggtttcaaaccaaagccgttctcaggctggagca
ggtcctagagcaggaccgagtgggcagcgccctccagggggcagtatgggtagtgtagtc
cagagggccagccaggccctgcaggagcgtggggagagactgggccgggctgaggacaag
acggtagacctaatgcacaaagcccagcagtttgcagacactgctcacaagctggctctg
aagtattcaaactag
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