Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415293
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Entry
139415293 CDS
T10872
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139415293
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139415293
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SALM family
139415293
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139415293
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
LRR_5
Ig_2
fn3
LRR_9
LRRCT
LRR_LRWD1
GP79
Motif
Other DBs
NCBI-GeneID:
139415293
NCBI-ProteinID:
XP_071019414
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Position
8:32941382..33006948
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AA seq
803 aa
AA seq
DB search
MDHILCCLLVLGTAVMMAHACPKYCVCQNLSESLGTLCPSKGLLFVPLDLDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFGDLETLRSLHLDNNRLMELGPEDL
RGLVNLQHLILNNNQLGRISDRTFEDLAPSLEDLDLSYNNLRSLPWNSVKQMVSLHQLSL
DHNLLDFIPEGTFTNLERLARLDLTSNRLQKLPPDPIFARAQDLVLLTTPYTPQLSLSIG
GNPLHCNCEVLWLRRLERDDDLETCASPPSLKGRYFWYVREEEFVCEPPLITQHTHKMLV
LEGQTASLRCEAVGDPTPTIHWMAPDDRLLGNSSRTAVYRNGTLEILITTSKDYGTFTCI
AANVAGESTASVELSIIQLPHLSNGTSQASQPKSRLSDITGTTRISKGVPKSPPEKVVTV
SEVTAISALVKWTVSKAAPKVKMFQLQYNCSDDEVLIYRMIPASSNAFLVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCAQFFTRDDYTQCQSLHSQFLGGTMILVVGGIIVATLLV
FIIILMLRYKATDNEGGGTGAISKLTSVSATHSQTNGGRLGQNGMPLPLPKPKAKVTIQD
EVVEFKCGSLQSSLTSSSSSSGGSMVGGGSHSPNSTLANMWRQAAPSKPRANLDHLLGAF
NSLELRAGQARGRGDLGEPSSSSSTLVAGGDRPPTDREPLLGHTMDSRLSRVLMLPLDSK
PKRSQSFDMGDCMDTNRQTEKAMASSASTATTPVCSYPRRISSIWTKRSLSVNGMLLQCD
EEGDMGGSKGTFESQEWVMESTV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcctgctggtcctgggaaccgcagtgatgatggcccatgca
tgccctaagtactgtgtctgccagaacctatccgagtcccttgggaccctgtgcccctcc
aaaggccttctcttcgtcccgttggacctcgaccggcgcactgtggagctccggctgggt
ggcaactacatcctccgcatcactcagcaggactttgccaacatgaccgacctggtggat
ctgacgctcagccgcaacaccatcagctacatccagcccttttccttcggcgacctggag
accctgcgttccttacacctggacaacaatcgcctcatggagctgggtccagaggatctc
agaggcctggttaacctgcagcacctcatcctcaacaacaaccagctgggacgcatctca
gacaggaccttcgaagacctggccccctccctggaggatctggatctgtcctacaacaac
ctgaggagcctgccctggaactcagtcaagcagatggtctccctccatcagttgagtctt
gatcataacctcctggactttatcccagaggggacctttactaatctagaaaggttggct
cgcctggatctcacctccaaccggctgcagaagctgcccccggaccccatcttcgccagg
gcacaggatttggtgctgttgaccacgccctacacccctcagctgtcccttagcatcggg
ggaaaccccctgcattgtaactgcgaggtgctgtggctgcggcggctggagagggacgac
gacctggagacctgcgcttcccctcccagcctgaaagggcgctacttctggtatgtgagg
gaggaggagtttgtgtgcgagccgccactcatcactcagcacactcacaagatgctggtg
ctggagggccagacggccagcctgaggtgcgaggctgttggagaccccacccctaccatc
cactggatggcccccgatgaccgtctccttggcaactcatcccgtaccgccgtctaccgc
aacggcaccctggaaatcctcattaccacctccaaggactacggtaccttcacctgcatt
gctgccaacgtggctggagagtccaccgcctctgtggagctgtcaatcatccagctgccc
caccttagcaacggcaccagtcaagcctcgcagcccaagtcccgcctctcagacatcaca
ggcaccactaggatcagcaagggggttcctaagagcccgcctgaaaaagtggtcactgtg
tcagaggtgacagccatttcagctctggttaagtggacagtcagcaaggcagcgcccaag
gtgaaaatgtttcagctccagtacaactgttcggacgacgaagtcctcatctacaggatg
atcccggcctccagcaatgccttcctggtgaccaacctggtgtcggggacaaagtacgac
ctgtgtgtcttggccgcctgggacgacaccgccaccaccctgactgccaccaacgtggtg
ggctgtgcccagttcttcacccgcgatgactacacccagtgccagtctctccacagccag
ttcctagggggcaccatgatcctggtggtgggtggcatcatcgtggcgacgctactcgtc
ttcatcattatcctgatgctgcgctacaaggccaccgacaatgaggggggtggcacgggg
gcgatcagcaagctgaccagcgttagtgccacccactcacagaccaatgggggccggctg
ggacagaatggcatgcctctgcccttgcccaaacccaaggccaaagtaaccatccaagac
gaggtggtggagtttaaatgcggatccctccagagcagccttacctcctcctcttcctcg
tcgggtggctcgatggttgggggtggctctcacagccccaacagcaccctggccaacatg
tggaggcaggcggccccctccaagccccgggccaacctggaccacctgctgggagccttc
aactccctagagctccgggcgggccaggccaggggtaggggagacctgggggagccatcc
tccagcagtagcactctagtggcgggcggcgataggccccccacggacagggagcccctg
ctgggccacacaatggactcacggctcagccgggtgctcatgctgcctctggactccaag
ccaaaaagaagccagtcgtttgacatgggggactgtatggatacaaaccgacaaacagaa
aaagcgatggcctccagcgcctccacggccacaacgccggtgtgcagctacccccggcgc
atcagcagcatctggactaagaggagcttgtctgtgaacggcatgctgctgcagtgtgac
gaggagggtgacatgggagggagcaaggggaccttcgagagccaagagtgggtcatggag
agtactgtctag
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