Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415305
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Entry
139415305 CDS
T10872
Name
(RefSeq) 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like
KO
K03663
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase [EC:
2.4.1.152
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00515
Mannose type O-glycan biosynthesis
ocla00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ocla00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
139415305
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
139415305
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
139415305
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139415305
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.152 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase
139415305
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
Lewis blood group
139415305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_10
Glyco_tran_10_N
Glyco_trans_1_2
Motif
Other DBs
NCBI-GeneID:
139415305
NCBI-ProteinID:
XP_071019439
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Position
8:complement(33229345..33238355)
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AA seq
365 aa
AA seq
DB search
MLSSTFLTGALRIFLVGILCLGGFVTLFFMYYKSALDCTPQPHYSKRPENRFLSKQPEPE
KPIMLLWFWPENRRFDFSDCATFFNIDGCHLTDDRSLYNKADGVLIFHKSIKHDLSNLPP
SPRPPFQKWIWYHVESPTNTIRIPGLDNLFNLTLSYREDADIPVRWRLTVRKGQGEDFVL
PKKDKLVCWIVSNNDPTTGTGVRHKYYRELVKHIKVELFGTAFARFLKYEDYYSTLSSCK
FYLSFENSVHKDYITEKLNGPLAAGTVPVVLGPPRQNYEDFVPGDSFIHINDFPDAKALA
EFLLKLDKDDEAYLRYFQWRRNFSAQQHLVQLSQEFIQAICYACDHIGKHWEYRVVHDVY
KWHFG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcaagtactttccttacgggagctttgcgtatcttcctggtagggatcctctgt
ctaggaggatttgtgacactgttttttatgtattacaaatcagctctggactgtactccc
cagcctcattactcaaagcgacctgagaacaggttcttgtctaagcagccagagccagaa
aagcccatcatgctgttgtggttctggcctgaaaaccgcaggtttgattttagcgattgt
gccactttcttcaacattgatggctgccacctgacagatgacaggtctctgtacaacaag
gcagatggtgtgctcatctttcacaaatccatcaaacacgatttatccaacttgcctcca
tcacctcgaccaccattccagaagtggatttggtatcatgtggaatcacctacaaataca
attaggatacctggtctagataaccttttcaatttgaccttgagttatagggaagacgca
gacatccctgttcgttggcgcttgaccgtaaggaaaggccagggtgaagactttgtgctg
cccaagaaggataaattagtttgctggattgtgagcaacaatgaccctaccactggaaca
ggggtaaggcacaaatattacagagaacttgtaaaacacattaaggtggaactctttggc
acagcctttgctagattcttgaaatatgaggactactactcaacactctccagctgtaag
ttctacctctcctttgagaactcggtccacaaagactacatcacagagaagctaaacgga
ccacttgcagcaggaacagtgccagtagtattgggcccaccgagacagaactatgaagac
tttgtcccaggagattccttcatccatattaatgactttcccgatgcaaaagccctggct
gaattcctcctcaagttggacaaggatgatgaggcatatctgcgctactttcagtggcgt
agaaacttctctgctcagcaacatctggttcaactgagtcaagagttcatccaagctatt
tgctatgcctgtgaccacataggcaaacattgggagtacagggttgttcacgatgtttac
aaatggcattttggttaa
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