KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415327
Entry
139415327         CDS       T10872                                 
Name
(RefSeq) WD repeat-containing protein 20-like
  KO
K24741  WD repeat-containing protein 20
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ocla04990]
    139415327
Domain-containing proteins not elsewhere classified [BR:ocla04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   139415327
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 EIF3I WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Ge1_WD40 NBCH_WD40 Beta-prop_EML
Other DBs
NCBI-GeneID: 139415327
NCBI-ProteinID: XP_071019486
LinkDB
Position
8:complement(35021210..35043100)
AA seq 643 aa
MAAEGGGKEMNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSG
NGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNPLTATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVRWVPGSESLFLVAHSSGSLYLYNVE
HTCGTTPPHYQLLKQGDGYAVHTCKSKSARNPLLRWTVGEGALNEFAFSPDGKFLACASQ
DGFLRVFGFDAAELHGTMKSYFGGLLCVCWSPDGRYIVAGGEDDLVTVWSFSDCRVIARG
HGHKSWVSVVAFDHCTTSVEDSDPPAEFSGSDEEFHEQIHFGGGRDRANSSQSHLSKRNS
TDGRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMSATSPPATGAATT
NTTTTTTAAAATTTTTTATTATTPTTNPPGTNGNNTVSSSSGNSGAPANSLPAPLPRSNS
LPHSSGPAGGSTTPNCHTSSSKGSSIIDSTFIATGVSKFATLSLHDTRKERHEKDHKRNH
SMGHISSKSSDKLNQLSSAARTAKADAAKTLGTLLCPRMEEVPLLEPLVCKKIAHERLTV
LIFLEDCLVTACQEGFICTWARPGKVGLLSSQNPANSPSGTVV
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggcggcggagggaggagggaaggagatgaacgaaattaaaactcaattcaccactcgg
gaaggtgtctataaactcctcactcactccgaatatagccgccctaacagggtgcctttc
aattcacagggctcgaatccggtgaaagtttccttcgtgaacgtcaacgaccagtccggc
aacggcgacagaatctgtttcaatgtgggccgggaactgtatttttatatctacaaaggc
gtaagaaaggcggctgacctgagcaagcccatagacaagaggatctacaaaggaacgcag
cccacgtgtcatgacttcaaccccctcacagccacagcggagagcgtctccctgctcgtg
ggtttctcggccggccaggtgcagctcattgacccaatcaagaaggagaccagcaagctc
ttcaatgaggagagactgatagacaagtctcgtgtgacatgtgtacggtgggttcctggc
tcagagagcctcttcctagtggcccactccagcggcagcctgtacctgtacaacgtagaa
cacacctgtggcaccacgccaccccactaccagcttctcaaacagggcgatggctacgcc
gtgcacacctgcaagagcaagtcggcccgcaaccccctactgcgctggacagtaggcgag
ggggcgctgaacgagtttgccttctcccccgatgggaagttccttgcgtgcgccagccag
gacggcttcctgcgcgtgtttggcttcgatgcagccgagctgcacggcacaatgaagagc
tacttcggtgggttgttgtgcgtgtgctggagcccggacggacgatatatagtggccggg
ggggaggacgacctagtgaccgtctggtccttctcagactgcagggtgatcgccaggggc
cacggccacaagtcgtgggtgagcgtggtggcgtttgatcactgtactaccagcgtggag
gacagcgacccacccgccgaattcagcgggagtgacgaggagttccacgagcagatccac
tttggaggggggcgggaccgggctaatagctcccaatcacatctttccaagaggaactct
acagacggcaggccagtcagcgtgacctatcgcttcggctcggtgggccaggacacccag
ctgtgtctgtgggacctgactgaggacatcctgtttccccacctgcccctgtcacgtacc
agaactcacactaacgtcatgagtgccaccagccccccggctactggggcggccactact
aatactactactactactactgctgctgctgctactaccactactactactgctactact
gctactactcctactactaacccacctggtaccaatggcaacaacacagtgagcagtagt
agtggtaacagtggcgccccagctaactcgctccccgcccccctgccgcgctccaacagc
ctgccacactcctccggccccgcagggggcagcaccacgcctaactgccacacgagcagc
agcaaaggaagcagcatcatcgacagcaccttcatcgccacgggcgtcagcaagttcgct
acactgtcgctgcacgacacacgcaaggagcgccacgagaaggaccacaaacgcaaccac
agcatgggccacatcagcagcaagagcagcgacaagctcaaccaactgagctctgcggcg
cggacggccaaggcggacgccgctaagactctgggcacgctgctgtgcccgcgcatggag
gaggttcctctgctggagccgctggtgtgtaagaagattgctcacgaaagactcactgtg
ttaatcttcctggaggactgtctggtcacagcctgccaggagggcttcatttgcacatgg
gccaggcccggtaaagtgggcttactatcatctcagaacccggccaactctcctagtggg
actgttgtatag

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