Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415335
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Entry
139415335 CDS
T10872
Name
(RefSeq) synaptosomal-associated protein 25-A isoform X1
KO
K18211
synaptosomal-associated protein 25
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139415335
Membrane trafficking [BR:
ocla04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
139415335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
Snapin_Pallidin
COG6_N
V-SNARE_C
Sec20
PMC2NT
Motif
Other DBs
NCBI-GeneID:
139415335
NCBI-ProteinID:
XP_071019501
LinkDB
All DBs
Position
8:complement(34855226..34893934)
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AA seq
204 aa
AA seq
DB search
MAEDLDMRNELSDMQQRADQLGDESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
EEGMDQINKDMKDAEKNLNDLGKFCGICSCPCNKMKSGGSKAWGNNQDGVVASQPARVVD
DREQMAISGGFVRRVTDDARENEMDENLEQVGGIIGNLRHMALDMGNEIDTQNRQIDRIM
EKADSNKTRIDEANQRATKMLGSG
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagacttggacatgcgcaacgagctgtcggatatgcagcaacgcgccgaccag
cttggagatgagtcgctggagagcactcgtcgtatgctacagctggtggaagagagtaaa
gatgctggtatcaggactttggttatgttggacgagcaaggagagcaactggagcgcatc
gaagagggaatggaccaaatcaataaggacatgaaggatgcagaaaagaatttgaacgat
ctaggaaaattctgtggtatttgctcctgcccatgtaacaagatgaagagtggcggcagc
aaggcttgggggaacaaccaggatggggtggtggccagccagcctgcccgtgtggtggac
gaccgcgaacagatggccatcagtggaggattcgttcgcagggtaacagatgatgcccgg
gaaaatgagatggatgagaacctggaacaggtgggaggcatcatcggtaacctgcgccac
atggccctggatatgggcaatgagatcgacacccagaatcgacagatcgacaggatcatg
gaaaaggctgattctaacaagaccaggattgacgaagccaaccaacgggccactaagatg
ctgggcagtggctag
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integrated database retrieval system
