Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415350
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Entry
139415350 CDS
T10872
Name
(RefSeq) transcriptional repressor protein YY1-like isoform X1
KO
K09201
transcription factor YY
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139415350
03083 Polycomb repressive complex
139415350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139415350
03036 Chromosome and associated proteins [BR:
ocla03036
]
139415350
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139415350
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139415350
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
139415350
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
139415350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
Raffinose_syn
zf-C2H2_ZN142
IBR
Motif
Other DBs
NCBI-GeneID:
139415350
NCBI-ProteinID:
XP_071019525
LinkDB
All DBs
Position
8:complement(36406345..36410638)
Genome browser
AA seq
386 aa
AA seq
DB search
MASGDTLYIEADGSEMPAEIVELHEIEVETIPVETIETTVVGEEDDEDEDDDDDQPMIAL
QPLVSDDPNSIHHHHQEVILVQTREEVVGGDDSDMHADGSYEDQILIPVPAPGVEDEYIE
QTLVTVAGKSSVGRMKRGGGGSGKKAGKKSYLGAAEASGRKWEQKQVQIKTLEGEFSVTM
WASDDKKDIDHESVVEEQIIGDNSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFASPF
SNSAGPYGQSPVRMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCA
ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD
GCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggcgatacgctgtatattgaggcggacggctcggagatgccggccgaaata
gtggagttgcacgagatagaggtggaaacgataccagtggagactatagagactacggtg
gtcggggaagaagacgacgaagacgaggacgatgatgatgaccagccgatgatagcactt
cagccgctggtatcagacgacccgaattcgatccaccaccaccatcaagaagtgatccta
gtgcagacaagagaggaggttgttggcggggatgattcggatatgcatgcggacgggagt
tacgaggatcaaatcctcatccccgtcccagcacccggcgtcgaagacgagtacatcgaa
cagactctggtgactgttgccgggaaaagctcggtgggtcggatgaagagagggggaggc
ggcagtggcaagaaagcggggaaaaagagctatttgggtgctgcagaagcaagcggtaga
aaatgggaacagaagcaggtgcaaataaagactctggagggggaattctctgttacaatg
tgggcttcggatgacaaaaaagacatcgaccatgagtcggttgttgaagaacagatcatt
ggtgacaattcccctccggactactctgaatacatgactgggaagaagctgccccctgga
gggatacctggcattgacctgtcagaccccaaacagctggcagagttcgccagccccttc
agtaactctgcgggtccctatggtcagagcccagtgcggatgaagccgaggaagataaaa
gaagatgacgctcccaggacgatagcctgccctcataaaggctgtactaagatgttcagg
gacaactcggcgatgaggaagcatctccacacccacgggcctcgcgtgcacgtctgtgcc
gagtgtggcaaggccttcgtagagagctctaaactcaaacgccaccaactcgttcacaca
ggggagaaacccttccagtgtacttttgagggctgtgggaagaggttttctctggacttt
aacctgcgcacacacgttcgtatccacaccggagaccggccctacgtatgccccttcgac
ggctgcaataagaagtttgcccagtcaaccaacctcaagtctcacatcctcacacacgcc
aaagctaaaaacaaccaatga
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