Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415362
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Entry
139415362 CDS
T10872
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
139415362
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
139415362
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Motif
Pfam:
GDPD
CBM_20
TreTu_C
Motif
Other DBs
NCBI-GeneID:
139415362
NCBI-ProteinID:
XP_071019550
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Position
8:37599841..37620339
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AA seq
670 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQPVEHDGTLWKRTVSVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESQLNIDDGQFGFHNGSVCM
DSGWLTCQTEIRLRLHFSKTSPVSITKKKYKKSRFRIKLTLEGVEEDDEDEEPEQSAASW
HKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYIIHSMDPDNLELTFDFFEEDMG
EHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKHSLELFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMNL
FLDIILSCVLQRAGKRRVVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRCR
TTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQANVFKVEEQHTLQETLKSFVCSCYSIPCQAPICAASSTVHNGS
AESDSGLSSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacccta
caaccggttgaacacgatggcacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtgccaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgccaggtgatagtcactaagtgggagacccatcagcagccacgtctgatgagccccaca
gaatcgcaacttaatattgacgatggccaatttggattccacaacggctcagtgtgtatg
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcacttctccaagacg
tctcccgtatccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtggaggaggatgatgaagatgaagagccggagcagagtgcagcatcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcctgagtgtggttacgccctggaggcctcacagtggacagagtacatcatc
cactccatggaccccgacaacctagaactcacttttgacttctttgaggaagacatgggc
gagcacgtgatgccaggggatgcccacccagggacggcgggtacggcctgcctcctctcc
tcattcttcgtggagagtggcaaggacactggcgtggtcactctgcccatcatgaaacgc
aactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatcgag
ggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtgccccc
ctggacgtgggccacagaggggccggcagcacacacgcagccaaacataccaaagtcagg
gagaacaccattgcttcgttcaaaagtgctgccaatcatggggctgcctatgtggagttc
gacgtccatctctccaaggactgtgtccccatcgtgtaccacgatctcacctgttgcatc
tccactaagaagaaaggagacaaacactctttggagctgtttgaagtgccggtcaaagat
ctcacatacgaccagctacagcagctcaagctgggccatgcttctgccttgaaggtgaac
gaccacaaagatgacgacgacgaggaagaggttgacgaacaccagcccttcccttcattc
tcgcagatcttccatgcagtgcctgaaaatgtgggcttcaacatcgagctgaagtggatt
tgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaacctg
ttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgcgtcgtcttc
tcctgcttcgaccccgacgtctgcaccatggttcgtcagaagcagaacaagtaccccatc
ttgttcctgacccagggcatctctgagacctaccctgagctcatggacatccgctgcagg
accacacagatcgccatgagctttgcgcagagcgaaaacatcctgggtatcagtgcccac
acagaggagctgcttcagaacctggagcacatccgagaggctcaatctaaaggcctggtg
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctaagggagcag
ggcatcgacggactcatctatgacaggatctgtgacgaccaggttgagcaggccaacgtc
ttcaaagtggaggagcagcacactctgcaggagactctgaagagctttgtgtgctcctgc
tactccatcccctgccaggcgcctatctgcgccgccagctccacggttcacaacggcagt
gcagagtccgactcgggcctcagctcttcctga
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