Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415378
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Entry
139415378 CDS
T10872
Name
(RefSeq) estrogen receptor-like
KO
K08550
estrogen receptor alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
139415378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139415378
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139415378
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
139415378
Nuclear receptors [BR:
ocla03310
]
3. Estrogen like
3A. Estrogen receptor
139415378
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
139415378
NCBI-ProteinID:
XP_071019587
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Position
8:complement(39298789..39320379)
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AA seq
558 aa
AA seq
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MYSEETRGGGGAASIDYLEGVDDYTAHAPGLVPFYSSSTASLDAHGPPSDGRLQSLLFVP
STPQLSPFLRHTSLPSQSIYLEISSTPVNRSSVVANQQSVSQEELSSASDTAVESGSGSG
SGPGVGVLEMAKETRYCVVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCT
IDRNRRKSCQACRLRNCYEVGMMKGGLRKDRGGRVFRRDKWRGGTAGDNSVLEHSKASPQ
DSSKNSSFGGGGGGEGRLKITMPPEQVLFLLQGAEPPALCSSQQLGRPYTEITMMTLLTS
MADKELVHMIAWAKKIPGFQELSLHGQVQLLESSWLEVLMIGLIWRSIPSPGKLIFSKDL
ILDRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCCYSVES
LHNSPEVQSMLDNITDALIHHISQSGASVQQQSRRQAQLLLLLSHIRHMSNKGMQHLYSM
KCKNKVPLYDLLLEMLDAHRIHSPGKVAQAWGQAKGEPLSTKGSSIGPKQGNQDTQPRSP
GPGVLEYGTPRSDQSPIP
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtactctgaggagacccgtgggggtggaggggcagcctccattgactacctggaggga
gtggatgactacactgcccatgcccctggcctcgtccccttctacagttcctcaaccgcg
tccctggatgcccatggacccccctcggacggccgcctgcagtcccttctgtttgtgccc
tccactccccagctcagccccttcctccgccacaccagcctccccagccagtctatctac
ctggaaatctcctccacacccgtaaacaggtcaagtgtggtagccaatcagcagtcagtg
tcccaggaggagctcagcagcgcctccgacactgcggtggagtcagggtcaggctcaggt
tcagggccaggggtcggtgtgttagagatggccaaggagactaggtactgtgtggtctgc
agtgactatgcctctgggtatcactacggagtttggtcctgcgagggctgtaaagccttc
ttcaaaaggagcatccaaggtcacaatgactacatgtgccctgcgaccaaccagtgtacc
atcgacaggaaccgtaggaagagctgccaggcatgccgcctcagaaactgttacgaagtg
ggcatgatgaaaggaggcttgcgaaaggaccgcggtgggcgggttttccggagggataag
tggcgtggtggcactgctggtgacaacagtgttctggagcacagcaaagcgtcccctcag
gatagtagcaagaacagcagcttcggtggtggaggaggaggagaagggcgtctcaagatc
accatgcctcctgaacaggtgctgttcctgctgcagggtgcggagcctccagccctgtgt
tctagtcagcagttgggccgtccctacacagagatcaccatgatgaccctgctcaccagc
atggctgacaaggagctggtacacatgatcgcctgggctaagaaaataccaggtttccag
gagctgtctctccatggccaggtgcagttgcttgagagttcctggctggaggtgctgatg
atcggactcatttggaggtccatccccagccctgggaaactaatcttctccaaggacctc
atacttgacaggagtgaaggggactgtgtggagggcatggctgagatctttgacatgctc
ctggccactgtgtctcgcttccgcatgctcaaactaaagcctgaggagtttgtgtgtctc
aaagccatcatcttgcttaactctggtgccttctccttctgttgttactctgtggagtcc
ctccacaacagcccggaggtgcaaagcatgttggataacatcactgacgccctcatccac
cacatcagccaatcaggagcctcggtgcagcagcagtccagacggcaggcccagctcctg
ctcctgctctcacacatcagacatatgagcaacaaaggcatgcagcacctgtacagcatg
aagtgtaagaacaaagtgcctctgtacgacctgctcctggagatgctggacgctcacagg
atccactccccaggcaaggtggcccaagcctggggacaggccaagggggagcccctctct
accaaaggctccagcataggacccaagcaaggcaaccaagatacccagcccagaagcccc
ggtcctggggtactcgagtatggcactccacgctctgaccagagccccattccatga
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