Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415395
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Entry
139415395 CDS
T10872
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1b
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139415395
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139415395
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Det1
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
139415395
NCBI-ProteinID:
XP_071019613
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Position
1:16936597..16942875
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AA seq
960 aa
AA seq
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MRLVLVKPTNATLRLDSTGDSCNDQDPDHSNSRGQSLPDKAPDVMQDCYSETALHHQTLV
PEQSTNSMSPSTSLPLATLNGVAPPRKSPPLKITLSHLSNQDLLCFCSQVGGTLELQRGS
PLMAEWHGTTVERPNDDCGSVCYSPSTKHGSGVAGFQPRSKQGFLKDCLSTFSKGTPPSL
QYTHSYPQNTLASSSSQFFTQKPNQSDPSTETIDHQQDNLKSRCRGKYWLKEYSQWQQTH
HHFKLKEHNLPPVLTSEKPEPSLNIPMKGNESSEVRQLLVLSQPQDQQQPPIETQHQWML
RNGLPSCCANEGGVHCGSQQPSLHQHLHQDPECQHCCDHFSTLKCHQSSLYPSSSPRVNN
SAAATSNKSSVHSSSSCHRWPENHSLVGKRQRQREQKVHPHTKTVGHVGSMPSLSKSSGP
LLPDTVVTNVKYSGDVGRPPSSLGASPPNLSELDSERQEPLQTLQRSVLEEVFSKGFSEN
NSKANSEGGSDTPQKKTKDIGYRLSQRKALFGKRKQLSDYALIFGMLGIVIMVMETELSW
GVYTKESSYSFSLKCLISLSTAILLGLIVMYHAREIQLFMVDNAADDWRIAMTYERIFLV
LLELLVCAIHPIPGQYVFTWTARLAFTYMPSVTDADVDIVLSIPMFLRLYLISRVMLLHS
KLFTDASSRSIGAINKINFNTRFVMKTLMTICPGTVLLVFSVSCWIIASWTVRICERYHD
TQEVTSNFLGAMWLISVTFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTAMVVAVVARRS
ELTRAEKHVHNFMMDSQLYKRVKNTAANVLRETWLIYKHMKLVKKIDHARVRKHQRKFLQ
AIHQLRRVKMEQRKLIDQANTLVDLAKTQNMMHDLVSDLQRRSKELDRRIGSLDDKLDSI
LVSLQTLPSLVSQAVTQQHRDFLDGLAPRVQTASKGSEDNWVPARRKRSPYTAPQTISYS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggttctagtcaaacccaccaatgcaacacttcggcttgattcaacaggagac
tcttgcaatgaccaagaccccgatcacagtaactcaagagggcagtccctaccagacaaa
gcccctgatgtcatgcaggattgctactctgaaactgccctccaccaccaaacgttagta
ccagagcagagcactaacagcatgtccccttccacttctctgccactggctactctgaat
ggagtcgctccaccaaggaaatctccaccattaaaaattacactttcccatctgagcaat
caagacctcctatgcttttgtagccaggtgggtggtactcttgaactgcagcgcggaagc
ccactcatggccgagtggcatgggaccacggtggaacgtcctaatgacgactgtggctct
gtttgctattctcctagtacaaaacacggttcaggggtggcaggtttccagccacgatca
aagcagggcttcctgaaggactgcctctccacattttctaagggaactcctccttctctg
cagtatacccactcctatcctcagaacaccctggcctcatcgtcatcccagtttttcacg
cagaaaccaaatcaatcagatccctcaacagagaccattgatcaccagcaggataattta
aaatctcgatgcagaggaaaatactggctgaaggagtatagtcaatggcagcagacccat
catcatttcaagcttaaagagcataacctaccaccagtattgacttctgaaaaaccagaa
ccttcgctcaatatacctatgaaaggcaatgagtcaagtgaagttaggcagctcttggtt
ttgtcacaacctcaggaccagcagcaacctcccatagaaacgcaacaccaatggatgtta
aggaatggtttacctagctgctgtgcgaatgagggtggagtacattgtgggagccaacaa
ccttccttacaccagcatctacatcaagaccctgaatgtcagcattgttgtgaccatttt
agcaccctaaaatgccatcagtcttctctttacccatccagcagcccacgagtgaataat
tcagccgcggctactagcaacaaaagcagtgttcactcctcttccagttgccatcggtgg
cctgagaaccatagtctagtggggaaaaggcaacgacaaagagagcagaaggtacatcct
cataccaaaacggttggccatgttggatcgatgccttccctgtccaagagcagtggccca
ctccttcccgacacagttgtgaccaacgttaaatacagtggggatgttggaagacccccg
agcagccttggagcttcgccaccaaacctttcagagctggactcagagagacaagagccc
cttcagactctccaaaggtctgtcttggaggaggtgttctcaaaaggcttcagcgagaac
aacagtaaggccaacagtgaaggaggaagcgacacgccacagaagaagaccaaggacatt
ggctatagattgagccagcgtaaggcactctttggaaagcgcaaacagttgagcgactat
gccttgatctttgggatgcttgggatcgtcatcatggtgatggagacggaattgtcctgg
ggggtttacacgaaggaatcctcatactcattctctctgaaatgccttatcagcctttca
actgctatattgctcggactaatcgtgatgtaccatgcacgggaaatacagctcttcatg
gtggataatgcagctgatgactggaggattgccatgacttatgagcggatcttcctagtt
ctgctggagctgctggtctgtgccatccaccccatcccgggccagtatgtcttcacctgg
acggcccggctggccttcacctacatgccctcagtaactgatgccgacgtggacatcgtc
ctctccatccccatgttcctcaggctctacctgatcagtcgcgtcatgctgctgcacagc
aagctcttcacagacgcctcgtcgcgcagcatcggcgcaatcaacaagatcaacttcaac
acgcgcttcgtcatgaagactctcatgaccatctgccccggcaccgtgctgctggtcttc
agtgtctcctgttggatcatcgcctcatggacagtgcgcatctgtgagagatatcatgac
acacaggaagtgaccagtaacttccttggggccatgtggctcatctctgtcacctttctc
tccattggttatggagacatggtccctcacacttactgtggaaagggtgtctgtctgctg
actggaatcatgggggccggctgcactgccatggtggttgctgtagttgcgaggaggtca
gagttgaccagagctgaaaagcacgttcacaacttcatgatggactctcagctatacaaa
cgagtaaaaaacacagctgccaatgtactcagggagacatggctgatctacaaacacatg
aaattagtcaagaagatcgatcacgccagggtacgcaaacatcagcggaaattcctgcaa
gccattcaccaattgcgcagagtcaaaatggaacagaggaaactcatcgaccaggctaat
acacttgtggatctagccaagactcagaacatgatgcatgatctggtgtctgatctgcag
cggcgcagcaaggagctggataggaggatcggtagtctggacgacaaactggactccatc
ctagtcagtctgcagaccctacccagcctagtctcccaggccgtcacacagcagcacagg
gactttctggatggcttggccccccgtgttcagacagcctcgaagggctccgaggacaat
tgggttcccgccaggcgcaaacgttccccctacactgcaccacagaccatatcttacagc
tga
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