Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415414
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Entry
139415414 CDS
T10872
Name
(RefSeq) DNA-binding protein RFX6-like
KO
K19521
regulatory factor X 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139415414
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other basic domains
RF-X
139415414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
139415414
NCBI-ProteinID:
XP_071019617
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All DBs
Position
8:complement(22691173..22698876)
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AA seq
913 aa
AA seq
DB search
MPMKRNTSPIRDGPFLQVHPPSTKKFCDASEEFMHTALSDEKLPRDFHGHSLSKFDEEDD
SGIKSEAEDTNETPSSEEDQDFVEYSKDLAFKQTTPRKSITQIIKDKKKQTQLTLQWLEE
NYIVCEGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLGTRGHSKY
HYYGIGIKESSAYYHLVYSGKGLTRFSGSKLKNEGGYTRKYSLSSKTGTLLPEFPSVQHL
VLQGSVSKEKVDTLIMMYKTHCQCILDNAINVNFEEIQNFLLHFWQGMPDHLLPLLDNSI
IVDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNLAKHWEDWMVSSLENLPECLSE
KKLPIARRFVSSLKRQTSFLHLAQIARPALFDQNVVNSMVVDIDQVDLNSIGSQALFTIS
SGDQDSDLYSEYDSITAFQELKDLLKKNATVESFIEWLDTVVEQKVIKPGKQNGRSIKKR
AQDFLLKWSFFGARVMHNLTLNNATSFGSFHLIRMLLDEYILLAIETQFNNDKEQDLQNI
LDKYMRNADGSKAAFTASPSSCFLANRNKPSAVSSDLSVKNESLSEHTYMTLSANQQANM
TVYQGSETDGFSLSGQMDFSQNSGPLMTPPISPAMANRGSVINQGPMAVIPQIACTTIQP
HISCQAFPDTMYQSLPSSSPSYYPTTSNYQAVFRPQTHAQAPAYHTRSDSSHYPSFSEQH
LAKDYFNSSCAVSPYSSRPTSNYSTVPDPGMETQGVQLLDSGGYNFVMSGLNSSGCQESA
YSTAGHSGYYGNSGYLDSQRLGSMIDQHVSVISSVSSIRSVPTYADIHDPLNILDDTGRK
PAGPYYPESDSLGTPGAPPLPSSISAPCMYGGPAQFHSQDAPLPHQGSSEVRDMVSSLPP
INTVFMGSSGGGP
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgaaacggaatacaagcccgatccgggatggcccatttcttcaagttcatcca
ccttcaaccaagaaattctgcgatgcctctgaggagtttatgcacaccgctttatctgac
gagaaattaccccgtgatttccatggacattcactctcaaagtttgacgaggaagatgat
tcgggaattaaatcagaagcagaggacactaatgaaaccccgtcttctgaggaggaccag
gattttgttgagtattccaaagatttggctttcaaacagacgaccccgaggaaaagcatc
actcagatcataaaagacaagaagaaacagactcagctcacccttcaatggctggaggaa
aactatattgtttgtgaaggggtttgtctgccacgttgcatcctgtacgcgcactaccta
gacttctgtaggaaggagaaactggatccagcctgtgctgctacatttggcaagacaatt
cgtcagaaatttccacttcttacaacaagaagacttgggacccgaggtcattcaaaatat
cattattacggcattggcatcaaagagagcagtgcctattatcacttggtgtactcagga
aaaggcttgacgagattttcagggagcaaactcaagaatgagggaggatatactcggaaa
tactccctcagctccaaaacaggaactttgctcccagaattcccaagtgtacagcatcta
gtgcttcaaggttctgtctctaaagagaaggtggacacgctcatcatgatgtacaaaaca
cattgtcagtgcatcctggacaatgccatcaatgtcaactttgaagagatacagaatttt
ctgctgcatttctggcaaggaatgcccgaccatcttttaccactgctggataactccata
atcgtggacatcttctgtgtgtgtgactctatactatataaggttctgacagatgtcctg
atccctgctacgatgcaggagatgcctgaaagtcttctggcagacatccgtaacttggcc
aagcactgggaagactggatggtgtcttctctggaaaacctcccagaatgcctctcagag
aagaagctcccgatcgcacgcagatttgtgtcctctctaaaacgtcagacctccttctta
caccttgcccagatcgcaagaccagctctttttgaccagaatgtggtgaactccatggtg
gtggatatagatcaagtggatttgaacagcatagggtcacaagcccttttcaccatctca
agtggtgaccaagactctgacctctactctgaatatgactctataacagcgttccaagag
ctgaaagacctactgaagaagaatgccactgtggaatcctttatcgagtggctggacact
gttgtagagcagaaggtcattaagcctgggaagcagaacggacggtccataaagaagcga
gctcaggacttcctcctcaagtggagtttctttggagcacgtgttatgcacaacctcacg
ttgaacaacgccacaagttttggttcgttccacctaatccgcatgctgctggatgagtat
atccttctggctattgagacacaattcaacaatgacaaagaacaagacctccagaatatc
ctagataaatacatgagaaatgcagatggcagcaaggcggcattcactgcctcccctagc
tcctgtttcctggccaaccgtaacaagcccagcgcggtgtccagtgatctgtctgtgaag
aacgagtccctctcagaacacacatacatgaccctgtcagctaatcagcaggcaaacatg
actgtctaccaaggctctgaaacagatggattctctctgtcaggacaaatggacttttcc
cagaacagtggccctctgatgacccctcccatctccccagccatggcgaacaggggcagt
gtcatcaaccagggacccatggccgtcataccccagatcgcctgcaccaccatccagccc
cacatctcctgccaagcgttcccagacaccatgtaccagagcctgccttccagtagcccc
agctactacccaaccacttccaactaccaggctgtgttcaggccccagacacacgctcag
gcccctgcctaccacacccgctccgatagcagccactacccgtccttcagtgagcagcac
ctggccaaagactacttcaacagcagctgtgctgtgtccccctacagctccagacccacc
tccaattacagcacagtccctgatcctgggatggagactcagggggttcagctactggac
tctggtggatacaactttgtcatgagtgggttaaacagtagtggctgtcaggagtctgcc
tactcaacagcaggacacagtgggtactatggaaacagtggctacctggatagccagagg
ctgggttccatgatagaccagcatgtgtcagttatcagcagtgtgagcagtatccgttcc
gtcccaacatacgctgatatacacgaccccctcaacatcctggatgacacaggcagaaag
ccggcaggcccttactaccctgagtctgactcactgggcacacctggagctcctcccctc
ccctcctcgatctccgcaccctgcatgtatggaggtcctgcccagttccactcccaggat
gcaccgcttcctcaccagggatcatctgaggtacgtgacatggtgtcatcgctgccaccc
atcaacactgtgtttatggggtctagtggaggaggaccgtga
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