Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415521
Help
Entry
139415521 CDS
T10872
Name
(RefSeq) matrilin-3a isoform X1
KO
K19467
matrilin
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139415521
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
139415521
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Matrilin_ccoil
VWA_2
cEGF
FXa_inhibition
EGF_CA
EGF_LRP2
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
139415521
NCBI-ProteinID:
XP_071019728
LinkDB
All DBs
Position
8:13488412..13496432
Genome browser
AA seq
341 aa
AA seq
DB search
MKSLFGSLVYCLFLFVSDVYGTYRLNGFDPQQVTAQSYAQRRNIARPPLRTLAPSATDNS
CRSRPLDLVFIIDSSRSVRPGEFEKVKIFLADMVDTLDVGPEATRVAVVNYASTVKIEFL
LKAHLNKPNMKQAITRIEPLAAGTMTGLAIKSAMTEAFTEESGARPKSKNIAKVAIIVTD
GRPQDQVEEVSAAARGSGIEIYAVGVDRADMTSLRLMASNPLEDHVFYVETYGVIEKLTS
KFRETLCGVDPCAMGHDCEHICVSSNASHHCKCRKGYILNLDQKTCTLKQIKAVVVVEDP
CKCEARLAFQMQTQAALQEITARLADMTGRVEQIENILGPV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttattcgggagtctcgtctactgccttttcctctttgtgtctgatgtatac
ggaacgtaccgtttgaatggattcgatccacagcaggttactgctcaaagttatgcgcaa
cgtagaaatattgcccggccaccgctgcggaccctcgctccttcagcgacagacaattcg
tgcaggagccgtcccctggacctggtcttcatcatcgacagctcccgcagcgtgcgccct
ggcgagtttgagaaggtcaagatcttcctggccgacatggtcgacaccttggacgtggga
ccagaagccacccgtgtggccgtggtcaactatgccagcacggtcaagatcgagttcctg
ctcaaggctcacctgaacaagcccaacatgaagcaggctatcacccgcatcgagcccctc
gccgccggcaccatgactggcctggccatcaagtcggccatgaccgaggccttcaccgaa
gagtcaggcgcccggccaaagtcaaagaacatcgccaaagtggccatcatcgtgacagac
gggcgtcctcaggaccaggtggaggaggtgtcagcggctgcccgggggtccggcatcgag
atctacgcggtgggggtggaccgagccgacatgacctctttgaggctgatggccagcaac
cctctggaagaccacgtgttctacgtggagacctacggcgtcatcgagaagctcacctcc
aaattcagggagaccctgtgtggtgtggacccctgtgccatgggacacgactgtgagcac
atatgtgtcagcagcaacgcgtcccatcactgcaagtgtcggaagggctatatcttgaac
ctggaccagaaaacgtgtactctgaaacagattaaggcggtggtggtggtggaggaccct
tgtaagtgtgaagccagactggctttccagatgcagacacaggccgccctccaggagatc
actgccagactagctgacatgacaggaagggtggaacagattgagaacattttgggacct
gtctaa
DBGET
integrated database retrieval system
