Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415546
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Entry
139415546 CDS
T10872
Name
(RefSeq) homeobox protein Nkx-2.2a-like
KO
K08029
homeobox protein Nkx-2.2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139415546
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139415546
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7312
Motif
Other DBs
NCBI-GeneID:
139415546
NCBI-ProteinID:
XP_071019755
LinkDB
All DBs
Position
8:16452089..16453340
Genome browser
AA seq
262 aa
AA seq
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MSFNNTKMGFSVKDLLDLPDTNGGSRTEETEDENEEETSEIMTQNPSLENAGNVPYKSLL
CDGGGNSYSKWLASSNSIQYSRLSVDSRNEPKSPELSADESQDIDRDTAVDSSDSGTKRK
RRVLFSKAQTYELERRFRQQRYLSAPEREHLANALRLTQTQVKIWFQNHRYKMKRARAEK
GMEMVHLVSPRRVAIPVLIRDGKPCDTSKTQEFEASFRAGIPLSAYSAYSLHHMHMRSHY
SPDAMSQLPSLHHLAQMYQWTW
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaacaacacaaagatgggcttctctgtaaaggaccttctggatcttcctgac
accaatggaggttctagaacggaggagaccgaggatgagaacgaggaggaaactagtgag
attatgacgcaaaatccatctttagaaaacgctggaaatgtgccctataagagccttttg
tgtgatggtggtggtaattcctactcaaaatggcttgcctcctccaacagcatccaatat
tcacgtttgtcagttgattctcgaaacgaacccaaatctccagagctctccgctgacgaa
tcccaagatatcgacagagacaccgcagttgacagcagcgactctggaacgaagaggaaa
aggagggtgctgttttccaaagcgcaaacatatgaactagagcgacgatttcgacaacag
agatatctctctgcgcctgagagggagcaccttgccaacgcactacgactgacacagacc
caggtgaagatctggttccagaatcaccggtataaaatgaagagagcacgcgctgagaag
ggtatggaaatggttcatctcgtgtccccaagacgggtggcaattccggttttgattcgg
gatggaaaaccgtgtgacactagcaaaactcaggaatttgaggcctcgttcagggctgga
atacctctctcggcgtatagcgcctattctctccatcacatgcatatgcgctctcactac
agccccgacgccatgtcacaactgcccagtctgcatcacttggcgcaaatgtaccaatgg
acttggtag
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integrated database retrieval system
