Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415655
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Entry
139415655 CDS
T10872
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139415655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139415655
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139415655
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
139415655
NCBI-ProteinID:
XP_071019869
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Position
8:34740151..34741835
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AA seq
358 aa
AA seq
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MDLLRVCVLCAAAFVTVSKAFTHNDMKDALLQKLGLDDVPKIHKRDLENLVIPTLVKNKY
LSMLKLHHNRRRRSLPSLAGILRGIRGNADISGVFVYSDTTRQRMVFDMDTRIPHNSEVT
MAELKLYNKAPNKRSMPERRNHRPVNNARVSIYWVDMLENGSNRTSLVDSRLIPIHETGW
KSFDVTQALHYWSKTQQKTPMHLEVWIEGERPGSYAAEIAKSVHFTTQDQADNTLGKPEL
VLYTLNLEEFGSRGDCENNPDKDTCCRDKYFINFRALTWTQYWIIEPAGYQAYRCAGGCK
QPKRNYGYGERKCSIAESAPLPIMYLVKKGDYTEIEVAEFPNMIVESCACTMDNISIV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctccgtgtttgcgtcttgtgcgctgctgctttcgtcaccgtctccaaggct
tttacgcacaacgacatgaaggatgccctgcttcaaaaacttgggctggatgatgttccg
aaaattcacaaaagggacttggagaatcttgtcatcccgacgctcgttaagaataaatat
ctgtcaatgctgaagctgcatcacaacaggcggcgcaggtctctgccgagcttggcgggg
atcctgaggggaattcgaggaaatgcagacatctctggggtgtttgtgtactcggacacc
actcggcaacggatggtcttcgatatggatacccgcatcccccataacagcgaggtgacc
atggccgaactgaaactgtacaataaagcccctaacaagcgctccatgcccgagaggagg
aaccaccggccagtcaacaacgccagagtctccatctactgggtagatatgctggagaac
ggctctaacagaacctctctggtggactcacggttgatccccatccatgagaccggttgg
aaaagctttgatgtcactcaggctttgcactattggtcaaagacgcagcaaaaaacacct
atgcacctggaggtgtggatcgagggcgagagacctggcagctacgcggcagaaattgct
aagagtgtccactttaccacccaggaccaggcggacaacaccttgggaaaacctgagctg
gtcctctacacgctcaacctcgaagagtttgggtctcgaggcgactgtgaaaacaaccca
gataaggacacgtgctgcagagataaatacttcatcaatttccgcgcgctcacgtggacc
cagtactggatcatcgagccagcgggataccaggcctatagatgcgccgggggatgcaag
cagcccaagcgcaactatggctacggggagaggaagtgtagcatcgcagagagcgctccg
ctgcccattatgtacctggtcaagaagggcgactacaccgagatagaagttgctgagttc
cccaacatgatcgtggagtcatgtgcctgcaccatggacaacatctccatagtttga
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