Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415669
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Entry
139415669 CDS
T10872
Name
(RefSeq) syntaxin-binding protein 5a
KO
K08518
syntaxin-binding protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139415669
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
139415669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139415669
NCBI-ProteinID:
XP_071019888
LinkDB
All DBs
Position
8:40100435..40257057
Genome browser
AA seq
1147 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSASSGQSGTQENNLMQETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQKRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYESGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYYADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEEKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSPGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSASEDRCKSPTSVLALN
HQQFYNGSGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTS
IDKEAREAITSFHFCETFARKGDSTITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPVIV
LPSGTLGRLKGSILRMAFLDNTGTFLPPAFELWYEPNAVGADSEERDKARKRRPVSVSPS
TSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACFCA
NGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQETCE
NLQEMLGELFTPVETPEAPNQGFFKGLFGGGATSLDREELFGEMQAGKASRGLAQHIPGP
QGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLKCK
DKKWYQF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtactggacggcctaaaggagcaagcgtcttcctcg
gcttcgtctggccagtcgggcacccaggagaacaatttgatgcaggagacccttcagtcc
gagaattttcaactctgcaagactgttcgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagtggggccctcagactg
tttggtcgtccaggtgtcgagtgctactgtcaacatgagagtggagccgctgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagatgacagcgtgcac
ctttggaacctgaggcagaagaggcccgccatcctccactcactcaagttcaacagagag
aggatcacgtttgtccacctgcccttccaaagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtccttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagcttataattggatatgagtctgggatcgtggtcttgtgg
gatctgaaatcaaagaaggcagactaccggtacacttatgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacattaagggccagggcaagccatttcagacgatcaccccacacggaaaacagccc
aaggatggaaagaagccagagccttgcaaacccatcctcaaagtggagtacaagaccact
agactgggagacccatttatgatcctgtccggaggtctgtcttatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggaaatggattacccc
atcgtagacttcctcacgctctgtgagacgccataccctaacgattttcaggaaccttat
gctgtggtggtccttctagaaaaggatttagtggtgatcgaccttgcacaaaatggttac
cccatcttcgagaacccctatccactgaccatccacgagtctcctgtgacctgctgtgag
tactatgctgactgccctgtggacctcatacccgcactttactctgttggctccagacag
aagcgacagggctacagcaaaaaggaatggcccataagtggtggtaactggggccttggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactatacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggaaaagcagaacacagagattgtggatgaggacccgttt
gctatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtgcgtttgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggtgaccgtgacctgcccacccccggagcagcctcacccagcccccagaccaccgga
cccccgacacacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgccttaaggtgcgtagtacccctctaaaacagtctccagggtaccaggtagatttggtg
gtgcagctggtgtgggtgagtggagagcccccccaacagatcacaagcctggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcggtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagagacagcctcgctctccacgcaagacacgccagccttccggaggcctgtgtgatatc
aacgagggctctgcctcggaagaccgctgcaagtcccccacttcagtgttggcgttaaac
catcagcaattctacaatggaagtgggggtagaggagcaaagatgtcacggaaattaagc
ttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccgcggggcgcc
aacccactagaccaccgggacaactccttcagccgttcacgctcctcctccgtcacctcc
attgacaaggaggcacgcgaggccatcacctccttccacttctgtgagacattcgctcgg
aagggggacagcaccatcacaccctgcctgtacgtgggcacttccctgggcacagtgctg
gctgtggccctcaacttgcctcctgctggggaacagaggctactgcagcctgtcatcgtc
ttgcctagcggtaccctggggcgtctgaagggcagtatcctgaggatggccttcctggac
aacacgggcaccttccttccccctgccttcgagctgtggtacgagcccaacgccgtgggc
gccgacagtgaggagcgagacaaagcccgtaaacgccgcccggtctctgtctcgccctcc
acctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaacaggctaaa
gtcatagcactgccctcccagaactgcatattcaaacacagcatcacagagacatcgttc
gtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgtttctgtgct
aacggacacatcatgaccctcagtctgccggggctgagaccgttgcttgatgtaaactac
ctgccgctgacagacatgcggatagcccggaccttctgcttcaccaacctgggccaggcc
atgtacctcacctcccccactgagatacagaggatcacatacagccaggagacctgcgag
aacctgcaggagatgctaggagaactattcacaccagtggagaccccggaggctcccaac
caaggattcttcaaggggctttttgggggaggagcaacttccctggacagagaggagcta
tttggtgagatgcaggcgggtaaagcatcccgtggccttgcccagcacatcccgggtcct
cagggcctggaaggcatgaagggggcagcctcgggcgtggtggcggacctggcacgtgcc
cggatagcgctggacgagagagggcagaaactgggcgagctggatgagaggacggctgcc
atgctggccagcgcagactcatttggcaaacacgcccacgatatgatgctgaagtgcaaa
gacaagaagtggtaccagttctga
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