Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415796
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Entry
139415796 CDS
T10872
Name
(RefSeq) fibrinogen alpha chain-like
KO
K03903
fibrinogen alpha chain
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139415796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139415796
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139415796
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139415796
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139415796
Hyaluronan
Extracellular matrix or blood plasma proteins
139415796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fib_alpha
MAP65_ASE1
Fibrinogen_aC
Motif
Other DBs
NCBI-GeneID:
139415796
NCBI-ProteinID:
XP_071019990
LinkDB
All DBs
Position
9:complement(5575927..5590760)
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AA seq
504 aa
AA seq
DB search
MKLLNILCFCLAVLASTWAEDAAAVLSPRGTRPVEHGYKADKCAAERSWPFCSDDDWGPK
CPSGCRIQGLLDKADHSLLKKIEKIRQLLDQNRAKHRSADQASKQTYDYLKEKLTSNAGN
DNSFYDLAERLRQRIVDIKIKIDRQLRILNTLKTSIKDQVIEMQRMEVDIDIKLRSCKGS
CKGYAEFSVDQSSYVALDKQMDQLEAQRVQSVETVGSLHIMKSRPLKDVLVDSKFKSSLA
GEQKQDFFPEVKSVKLTLEAEGSSASSAASVSKVPGTHFQPSTSGSSSSSSSSSSSSWST
GSGSKDGSKKTITELGGGGGGGGGTRGDGDGDFFKGMGGLGGGLGSLGGGDFTSTGHQTT
HISSCTKTIKKTTVHTKDGPVERIEEVSSGPGCEAMKLGGGGGGMGDFFPSLSSSSSSSS
SSSFTKTTSHGSNKGGSSLLSSTKTGGAADGFGADSFGMDLGVFMRGKDDDDVPDFLSHS
HGVKTSVRSKRQADYVGKSPDDQE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagctactaaatattctctgcttctgcctggctgtcctcgcctccacttgggctgag
gacgcagcggccgtattgagccctcgtggaacccgaccagtagaacatggttacaaggct
gataaatgtgccgcagagaggagttggcctttctgctcagatgacgactggggtcctaag
tgcccgtcaggttgtcgtatccagggtctgttagacaaggcagaccattccctgctgaag
aagatagagaagattaggcagctccttgaccagaacagagccaaacaccgttctgccgac
caggcatccaaacagacctatgactacctcaaggagaaactcacctccaacgcaggtaat
gacaacagcttctatgacctggctgaacgcctccgtcagaggatcgtcgacatcaagatc
aagatagaccgccagctgaggatcctcaacactctgaagaccagcatcaaagaccaggtt
atagagatgcagaggatggaggtggacattgacatcaagctgcgctcctgtaaggggtct
tgtaagggctacgctgagttctccgttgatcaatcatcctacgtggccctggacaagcag
atggaccagctagaagcccagagggttcagtctgttgagaccgtcggctcgctgcacatc
atgaagagccgcccgcttaaagacgtcttggtcgacagcaagtttaagtccagcctggca
ggggagcagaagcaggatttcttcccggaggtgaagtccgtgaaactgaccttggaggcc
gaggggtccagcgcttcatctgccgcctctgtcagcaaggtcccgggtacgcacttccag
ccttcgacctcagggtcttcatcttcatcttcttcatcttcatcatcgagttggtcaacg
ggatcagggtcgaaggacgggtcgaagaaaacgatcacggagctgggtggtggtgggggt
ggtggtggaggtacgaggggggatggagatggggatttctttaaggggatgggtggactc
ggcggagggctggggagtcttggaggcggagatttcacctctaccggtcaccagaccacg
catatatcgagctgtaccaagaccataaagaagacgacagtgcatacgaaggacgggccg
gtggaacgcatcgaggaagtttcgagcggaccaggctgtgaggcaatgaagctcggcggc
ggcggaggagggatgggggacttcttcccatccctctcttcctcttcctcctcctcctcc
tcctcctcattcaccaaaaccacaagccacggcagtaacaagggaggcagtagcctcctc
agcagtaccaagaccggcggcgctgccgacggcttcggagctgattcattcggaatggat
ctcggagtgtttatgcgcgggaaagatgacgatgatgtcccggatttcctaagccacagc
cacggcgtgaaaactagcgtccggagcaaacggcaggcagattatgtgggaaaaagtcct
gatgaccaggagtaa
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