Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415902
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Entry
139415902 CDS
T10872
Name
(RefSeq) high mobility group protein B3-like
KO
K11296
high mobility group protein B3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139415902
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139415902
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
139415902
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139415902
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
Toxin_20
Motif
Other DBs
NCBI-GeneID:
139415902
NCBI-ProteinID:
XP_071020162
LinkDB
All DBs
Position
9:12859257..12865608
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AA seq
206 aa
AA seq
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MAKGTPGKPKGKMSSYAYFVQTCREEHKKKTPEIPVNFAEFSKKCSGRWKTMSGKEKGKF
DDMAKQDKVRYDNEMMHFAPGGKKGRKKDPNAPKRPSSGFFIFCADHRPKIKAQHPSLGI
GDVAKKLGEQWNNLTDATKQPYLIKANKLKDKYQKDVADYKSGKGKVVVPSMAMAPKPMT
KSNMDDDDDDDDEEDEEEEDEEEDDE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcactccagggaagcccaagggcaagatgtcctcctacgcctacttcgtt
cagacctgccgtgaggagcacaagaagaagacccctgagatacctgtcaacttcgctgag
ttctccaagaagtgctccggaagatggaagacgatgtctggtaaggagaaggggaagttt
gacgacatggcgaagcaggataaggtgcgttacgacaacgagatgatgcacttcgcccct
ggaggcaagaagggaaggaagaaggaccccaacgcaccaaagaggccctcctctggtttc
ttcatcttctgtgcggaccaccggcccaagatcaaggcccagcaccccagcctgggcatc
ggggacgtggccaagaaactgggggagcaatggaacaacctgactgatgccaccaaacag
ccctacctgatcaaggccaacaaactcaaagacaaataccagaaggacgttgctgactat
aagtccggtaagggcaaagtggtagttccgagcatggcaatggccccaaagcccatgacg
aagagtaatatggacgacgatgatgatgacgacgatgaggaagacgaggaggaggaggat
gaggaggaggatgacgagtag
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