Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415920
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Entry
139415920 CDS
T10872
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139415920
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
139415920
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
139415920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139415920
NCBI-ProteinID:
XP_071020188
LinkDB
All DBs
Position
9:13799587..13837503
Genome browser
AA seq
1252 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGATSPDIPESSTAKFLSKQKDIPEIPKSVKQTPVSKKS
VTRRSTKAPRAIGLSSSRSREDVSEGSLSSKGALGAPVVPLPSGIPATSGAPSPATPSKA
EPPASKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKHKIQLEQLQEWKTKMQEQ
QTDLQKQLKEAKKDAREALEAKDRYMEEMSDTADAIEMATLDKEMAEERSESLQVEVESL
KEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKDALVRMRDLSSSEKQEH
VKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNL
DLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQE
TVADYQQTINKYRQLTASLQDANKELTSAQNANAEQVQPPPPAELFDFKIKFAETKAYAK
AIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQ
EKFDLNGNPVERTGVKMRGPPGEQLSFASGLVYSLTLLQATLHKYQQALNCCSVQVYTQM
GTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQTEDCTVQ
LADHIKFIQSALDCISAEVVRLRAFLQPGQEGLALNILLKDLDTTCSDIKQFCKKIRRRM
PGTDVPGVPAALSFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNALK
LDDVAFKAVEQVYGSQGLNPHECLRQSCSAVISTMNKMATAMQEGEYDAERPQGKAPPVE
ARAAALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKKLDTSTK
DADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQSKSTI
EGLRAPPASGIASIVTGSAGAALAPGAGGLSGPMQVVDSPLLRQQVEAQRLGIKHLKNEN
NRLKAEKMRAQLASLPPLHVPKLNLREATSSSSPPAEGTLHGILYRKTEQLLGTLLKMTA
TVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVAEHVVSQQPGAKVSSDFATF
PISSFVKAKEEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLIA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggacgggggaggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggccagcgtggcacggtggcgtatgtgggcgccacgctctttgccacgggtaagtgg
gtgggtgtgatcctggacgagcccaagggcaagaatgatggcacggtccaggggaagaga
tacttccagtgtgatgagaactgcggcatctttgtgcgccagtcccagatccagctagtg
gaagatggtgccacctctccagacatcccagaatcttccactgccaagttcctgtccaag
cagaaagacatccctgagattccaaaatcagtcaaacagacgcccgtttccaagaagtcc
gtcacccgtcgtagcaccaaggctccccgggccatcggcttgtccagctctcggtccagg
gaggatgtcagcgagggcagcctgtcttccaagggtgcgctgggggctcctgtcgtcccc
ctgcccagcggcatccccgccacgtccggagctccatcccccgccacgcctagcaaggct
gagcctcctgcatcaaagcaggaggaagagtctctgcgtggccaggtgaaggacctagag
gagaagctggagaccctgaagatgaagcgggcggaggacaaggtcaagctgaaggagctg
gagaaacacaagattcagctggagcagctccaggagtggaagaccaagatgcaggagcag
cagacggacctgcagaaacaactcaaagaggccaagaaggatgcccgggaggcattggag
gccaaggaccgctatatggaggagatgtcagacacagcggacgccatcgagatggccacc
ctggacaaggagatggctgaggagcggtccgaaagcctgcaggtggaggtggagtcgctg
aaggagaaggtggaggaactcaccatggacctggagatcattaaacacgaggttgaggag
aaaggttctgacggagctgcctctagttaccacgtaaagcagctggaggagcagaacagc
aggctgaaagatgctctggtcaggatgcgtgacctgtcgtcgtctgagaagcaggagcac
gtgaagctgcagaagcagatggagaagaagaatggagagctggagactctgaggacccag
aaggagaaactacaggaggagatgaagcaggctgaggccaccattgatgagttgaaggag
caggtggatgctgctctcggggcagaggagatggtagagactctaactgagaggaatctg
gacctggaggagaaagttagagagctgagagagacagtcactgacctggaagcgatcaac
gagatgaatgacgagcttcaggagaacagccgagagacagagatggagctgagggagcag
ttggacctgaacggggccagggtgagagaggcccagaagagagtggaggctgctcaggag
actgtagcagactaccagcagaccatcaacaagtaccgccagctcactgccagcctgcag
gatgccaacaaggaactgaccagtgctcagaatgccaacgcagagcaggtccagcctcct
ccaccagctgagttgtttgacttcaagatcaagttcgctgagaccaaggcctacgccaag
gccatagagatggagctgaggaagatggaggtgggccaggccaacagacaggtgtctctc
ctcacatccttcatgcccgactccttcctgcgtcacggtggagaccacgactgtatcctg
gtgctgctgctcataccaagactcatctgcaaggctgagttgatcagtaagcaggcccag
gagaagtttgatctgaacggtaaccccgtggagaggactggggtgaagatgagaggacca
cctggagagcagctcagcttcgcttcaggactggtctactctctcaccctgctgcaggcc
acgctgcacaaataccaacaagctctgaactgctgcagtgtgcaggtgtatacgcagatg
gggactctctactcagagatgagtgtccatgagcgttccctcgacttcttcattgacctg
ctgcacaaagaccagctggatgagactgtacacgtggagcctctcaccaaggccatcaag
tactaccagcaactgtacagcatccacctagctgagcagactgaagactgcaccgtgcag
ctggctgatcacatcaagttcatccagagtgcgttggactgtatcagtgctgaggtggtg
cgtctcagggctttcctgcagccgggacaggaggggctggctctgaacatccttctgaag
gacctggacaccacgtgcagtgacatcaaacagttctgtaagaagatcagacgcaggatg
ccagggaccgatgtaccaggggtgccagctgctctgtcttttggagctccggtgtcggag
acgctgacggactgcaggcgtcagctgacgcgggtggtcgccgtgctacaggaggtggct
gcggcgggggcacagatggtcgctcccctcggggagcaggaggggctcaacgctctaaaa
ctggatgatgtggccttcaaggctgttgaacaggtgtatgggtcccaaggtctaaacccc
catgagtgtctgcgtcagtcctgcagcgctgtcatctccaccatgaacaagatggccact
gccatgcaggagggagagtatgatgctgagagaccacagggaaaggctcccccagtagag
gctcgtgcagcagcactcagggcagagatcactgatgcagagggcctgggagtcaaactg
gaagacagagacactgtcatcaaggagctcaagaagtcacttaagatcaagggagaggag
ttgagtgaagcccacgtccgtctcagtctcctggagaagaagctggacacgtcgactaaa
gacgcagacgaacgtgtagagaagatccagaccaaactggatgagaccctggccctgctc
aagaagaaagagaaggagtttgaggagaccatggacgccctgcaggcagacatcgaccag
ctggaggcagagaaggcggagctgaagcagcgtctctccagccaatcaaagagcaccatc
gagggcctcagggccccgcctgcctcgggcatcgcctccattgtcacgggatccgccgga
gccgctcttgccccgggagcagggggtctgtctgggcccatgcaggtggtggactcccct
ctcctccgccagcaggtggaggctcagagactgggtatcaaacacctgaagaacgagaac
aatagactcaaggcagagaagatgagagcccagttagcctctctccctcccctccacgtc
cccaagttaaacctgagagaggccacctcttcttcctctccccctgctgaggggactctc
cacgggattctctacaggaagacggagcagctcctagggaccctgctcaagatgactgcc
acagttaaagtggtcgacatcaccgggaagacaccagtgagtgctagtgctcagctcttg
gaccagacggctcggctgcagagcctgagtgacgccctggacaagctgaagggtgaagtg
gcagagcacgtggtttctcagcagcctggggcaaaggtctcctctgactttgccaccttt
cccatttcctctttcgtcaaggcgaaggaggagaagcagggaggcacggtgtttgtaggc
cgcgtggccatcccgtgtgccaagggccaggagcaggtgcaccgtcttgtcctatcacag
caacacctgcagcaagtgcaccgcctcctcatagcctaa
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