Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415959
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Entry
139415959 CDS
T10872
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139415959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139415959
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
hnRNP proteins
139415959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139415959
NCBI-ProteinID:
XP_071020256
LinkDB
All DBs
Position
9:complement(15283294..15293665)
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AA seq
337 aa
AA seq
DB search
MKSESGRSFALEYKQYGVLFFEASFLSSDKSSLMAGNVTNKTDPRSLNSRVFIGNLNTLL
VTKADVEAIFSKYGKIVGCSVHKGFAFVQYANERNARAAVGGEDGRMIVGQVLDINLACE
PKHQRLKTVKRSAGDMYSSSFDLEYDFQRDYYDRMYPYQSRVPPPPPPPLSRAVIPSKRP
RVSLSGGGGGRGGGGAGGSRRTKTNFSSSRSSQSRVSTSRTMKADDLQTIKRELTQIKHK
VDYLLESLERMEKDHTKKLDMKSSGKPELGEVSPLHCGGKKEESLKRERESQLLNDSEEE
EGDLLEEEEEVKSRGREDDDEEEEGEDDGDSANGDDS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaaagtgggcgttcgtttgcactggaatacaaacaatacggtgtattgttt
tttgaggcatcttttttgagcagcgacaaatctagcttgatggctggcaacgttaccaac
aagactgaccctcgctccctcaactcccgggtcttcatcgggaacctcaacactctcctg
gtcaccaaggcagacgtggaggccatcttcagcaagtacggcaagatagtgggctgctcc
gtgcacaaggggttcgcctttgtccagtatgccaatgagaggaatgcccgggccgccgta
gggggcgaggatgggaggatgatcgtaggacaggtgctggacattaaccttgcttgcgaa
ccgaagcatcagagattgaagactgtgaagcgctctgcgggagatatgtacagttcttca
tttgatttggaatatgacttccagagagattactatgaccggatgtacccgtaccagtcc
cgcgtgccccctccacctcctccccccctgtcccgggcggtgatcccctccaagcggccc
cgggtcagtttgagtggaggcggtggaggaagaggaggtggaggagcagggggcagccga
cgcaccaagaccaacttctcatcctccaggagcagccagagcagggtctccacctcccgc
accatgaaggcagatgacctgcagaccatcaagagagagctgacccagatcaaacacaag
gtggactacctgctggagagtctggaacgcatggagaaggaccacaccaagaagttagac
atgaagagtagtgggaagccggaactcggggaggtgtctcctctccactgtggaggaaag
aaggaggagagcttgaagagggagagggagagccaactgctcaatgactccgaagaggag
gagggagacctactggaggaggaggaggaggtgaagagtcggggaagggaagatgacgat
gaagaggaggaaggtgaggatgatggagatagcgccaacggagacgactcttaa
DBGET
integrated database retrieval system
