Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416089
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Entry
139416089 CDS
T10872
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139416089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139416089
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139416089
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139416089
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
139416089
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139416089
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BAR
PH_8
PH_11
PH_21
BAR_2
PH_17
SirA
Motif
Other DBs
NCBI-GeneID:
139416089
NCBI-ProteinID:
XP_071020456
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All DBs
Position
9:21464102..21488144
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AA seq
765 aa
AA seq
DB search
MTVKLDFEECLKDSPRFRADIEVVEGDVSELETRLEKLVKQCHSMLEAGRAYCQTSKSFV
TGLKELGHHCSGDNMMGECLEKFSQKLEVILEAQGEVIETTQKSVKLKLQSFVKEDVRRF
KDVRKEFERGSESLEAALGRNAQAPRGKQHEVEEASHALLNARKTFRSGALDYVLQINVI
EAKKKTDILMAMVSMMEAQSQFFQQGHQSLSELADYRRTLSEEHTQLVLNSAREKRDMEQ
RHAAIKKKDVSYDNSLMDFCADAPNGIAMEGYLYKRASNAFKTWSRRWFSIQKNQLVYQK
KFKEQPTVVMEDLRLCTVKVCADNERRFCFEVVSPSKSCLLQADSERQQQGWISAVQNSI
ASAFQERREDPHSPRERCSSVSGSPGGGVFGDQEKTGGREALDQVQGIPGNKQCCDCGEP
GPDWASINLGITLCIVCSGIHRSLGVHFSKVRSLTLDSWEPELVRLMCELGNTAINRIYE
ARIDEITIKKPHPSSPRGDKESWIRSKFVEKKFIQKLPETGRNIPLRRSSARRNRANTQE
RPAGSRPPLKPKPNRATLPRLPGLNQSDLLQKNNTGIHKDGEDDEEEDLSGLHPGALLYR
SAALQHFPVMADALAHGADVNWVNTVEESSTPLIQAVTANSLAACEFLLQNGANVNTADS
NGRGPLHHATILGHTGLVCLFLKRGADYNARDHTQKDPITIAVETANADIVTLLRIAKMN
KEMREMDGAFGQPGDETYQDIFRDFSHMASNNPEKLKRRSTDFKT
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaaactggactttgaagagtgtctcaaagactccccccgattcagggctgac
attgaagtggtggaaggagatgtcagtgaattggagacgcgtttagaaaagctggtgaag
cagtgccactccatgctggaggctggcagggcctactgtcagaccagcaagagctttgtc
acagggctcaaagagctgggccaccactgttctggggacaacatgatgggggagtgtttg
gagaaattctcccagaagctggaagtgattctggaagctcagggggaagtgattgagacc
acacagaagtcggtgaagttgaaactgcagagttttgtgaaagaggacgtgcgtcggttc
aaggatgtgcgtaaggagtttgagcggggcagtgagagtctggaggcggcattgggcagg
aacgctcaggccccccgggggaagcagcacgaggtggaggaagccagccacgccctcctc
aatgctcgcaagaccttccgttccggggccctcgactacgtactgcagatcaatgtcatc
gaggccaagaagaagaccgacattctgatggcgatggtgtctatgatggaagcccagtcc
cagttcttccaacaaggtcaccagtccctctctgagctggccgactatcgacgcaccctg
agtgaagagcacactcaactagtgttgaattccgcaagggagaagagagacatggaacag
agacacgctgccattaagaaaaaggatgtctcgtatgataactccttaatggatttctgt
gctgatgcacccaacggtatcgccatggagggatacctgtataagagagctagcaatgcc
ttcaagacttggagcaggcgctggttctctatccagaaaaatcaactggtctatcagaag
aaattcaaggagcagcccactgtggtgatggaggacctgcgtctgtgcacagtgaaggtc
tgcgctgacaacgagagacgattctgctttgaggtggtctcaccgtccaagagctgtctg
ttacaggcggactcagagcgtcagcaacagggctggataagtgctgtccagaacagcata
gcctcagccttccaggaacgcagagaagacccacacagcccaagggagcgttgcagctca
gtgtcgggcagcccaggaggaggggtgtttggggatcaggaaaagacggggggccgcgag
gctctggatcaggtccagggcatcccgggaaacaagcagtgctgcgactgtggagagcct
ggtccggactgggcctctattaacctggggatcaccctctgtatcgtctgttctgggata
cacaggagtctgggtgtccacttctccaaagtacgctccctcaccctggactcctgggaa
ccagagctggtcaggttgatgtgtgagttgggcaacacagccatcaacaggatctacgag
gcgcggattgatgagatcaccatcaagaaaccccacccatccagtccaaggggtgataag
gagtcgtggattcgttctaagtttgtggagaagaagtttatccagaagctcccggagacg
ggtcggaacattccactgcggcgctccagcgcccggaggaacagagcaaacacccaagaa
aggccagccggctcacgcccaccactcaaacccaaacccaatcgggccaccctgccacga
ctcccagggctcaaccagagtgatcttcttcaaaagaacaacacaggcattcacaaagat
ggtgaagatgatgaagaggaggacctgtctggtcttcatcccggggcgttgttataccgg
tctgcagcgctgcagcatttccctgtcatggccgacgccctggcccacggagctgacgtc
aactgggtcaacaccgtcgaggagtcaagcaccccactcatacaagcagtcaccgcgaac
tccttggcagcgtgtgagttcctgctacagaacggtgccaatgtcaacaccgcagacagc
aatgggagaggacccctacaccacgccactatactgggacacactgggctggtgtgtctg
ttcctgaagagaggggcggactacaatgccagagaccacacccagaaagatcccatcacc
attgccgtggagaccgccaacgctgacattgtcaccctgctgcgaatcgccaagatgaac
aaggagatgcgggagatggacggagcctttggccaaccaggtgatgaaacgtaccaggac
atcttcagggacttctctcacatggcctctaacaacccagagaagctgaaacggcgcagc
acagattttaagacttga
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