Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416182
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Entry
139416182 CDS
T10872
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03022
Basal transcription factors
Brite
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139416182
Coactivators
SAGA/TFTC/STAGA complex
139416182
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139416182
STAGA complex
139416182
TFTC complex
139416182
SAGA complex
139416182
SLIK complex
139416182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139416182
NCBI-ProteinID:
XP_071020643
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Position
9:28448113..28455032
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AA seq
637 aa
AA seq
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MEERRFAEVPRESVKLMAESAGVELSDDVAALLAEDVCYRLREATQSSSQFMRHAKRRKL
TVEDFNRALRWSNVEAIAGYGAQDALPFRPIKEGELFFVDDRDVNLVELALATNIPKGCA
ETMVRVNVSYLDGKGNLEPQGTVPSAVQTLSEDLLKYYQQITRAILGEDPHLMKVALLDL
QSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVM
YCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRP
LCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAIL
VAVERLLKMKALSLSQPAEGSSSAQPGSGGVMGFRVSSPGLSPPPEPLSEAALGIASHLQ
GPGGAGTPWDDWTPVPLPAMYCELYSFFGDSLAVRFSTGPSLGGCPPSAPSQPPDTRKEP
PGPAANPDTTRKMPQLTANLNISPRQDGSPRTEPAPPSLAATAPGRSLARSSSSSSIQRR
NSSSRPGQRSAGPSRDVFTKARFPPPQTGPPTFSFLIGGRQMGRRCQGRRFQTSFSSPPP
LSTVPPRAYAHKLPVIGRVGKPVRRWTCSHYSLHLPL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggcgcttcgctgaagtccccagagagtctgtcaaactcatggctgagagt
gcgggagtagaactcagcgacgatgtggctgcattgttggctgaagatgtctgctaccgg
cttagggaagccacacagagcagctctcagttcatgagacatgccaagaggaggaagctg
acagtagaggacttcaacagagcactgcgctggagcaatgtggaggccatagctggctac
ggtgcgcaagatgccctacctttccgaccgatcaaggagggcgagctattctttgtggat
gaccgtgatgtcaacctggttgaacttgccctggccaccaacatacccaagggctgtgca
gagaccatggtgcgagtgaacgtgtcttatctggatgggaaaggcaacctggagcctcaa
ggtacagttcccagtgctgtacaaactctctctgaggatctgctcaagtactaccagcag
atcacccgggccatactaggagaggacccacaccttatgaaggtggctttgctggatctc
cagtccaactccaagattgctgccctcctgccatattttgtatatgtcatcagtggggtg
aagtctgtgagccacgacctggagcagctgaaccgtctgctgcacatggtgaagagtctg
gtgcagaacccctacctgtacctcggctcctacgtgcgtagcctggtgtccagcgtcatg
tactgcatcctggagccgctggccgcctccatcaaccccctcaacgaccactggacctta
agggactacgcagcacttctgctcagccacatcttctggacccatggagacctggtcagt
ggtctgtaccatcagattctgctgtctctgcagaaggttttgtcagacccggtccgccca
ctttgttctcactatggagctgtcgtggggctacacgcactcgggtggaaggctgttgag
cgggtgttatatccacacctgccagcctactgggctaacctgcaagctgtcctggatgat
tactccgtctccaacgcccaggtgaaagcagacggacacaaggtctacggagccatcctg
gtggcggtggagcgcctgctgaagatgaaagccctgtctctgtcccagccagcggagggg
agcagcagcgcccagccgggctctgggggcgtgatgggtttcagggtgagttcccccggg
ctcagcccccctccagagcccctctcagaggccgccctgggaatcgccagccacctgcag
ggacctgggggggctggcaccccctgggatgactggacccccgtccccctgcccgccatg
tactgtgagctctactccttcttcggcgacagcctggcggtacgcttcagcacgggtccc
agcttgggaggttgccccccgtcagccccctcccagccccctgatacgaggaaggagccc
cctggtcccgctgctaacccagacaccacgcgcaagatgcctcagctcactgctaacctc
aacatcagcccccggcaagacgggagccctcgcactgagcccgccccacctagtctagct
gccactgctccaggaaggtccctggctcgctcttcctcctcatcctccatccagcgcaga
aactcctcctcccggccgggacagcgctcagcgggtccatcccgtgacgtgttcaccaag
gcccgtttcccccctcctcagaccggaccccccacattctccttcctcatcgggggacgt
cagatgggccggcgctgccagggtcgccgcttccagaccagcttcagctctcccccaccc
ctgtccaccgtaccgccccgtgcctacgcccacaagctgcccgtcatcgggagggttggc
aaaccggtgcgccgctggacctgctctcactactccctgcacctgcccctctga
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