Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416271
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Entry
139416271 CDS
T10872
Name
(RefSeq) xan_ur_permease domain-containing protein
KO
K14611
solute carrier family 23 (nucleobase transporter), member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
139416271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139416271
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC23: Na+-dependent ascorbic acid transporter
139416271
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Gene cluster
GFIT
Motif
Pfam:
Xan_ur_permease
Motif
Other DBs
NCBI-GeneID:
139416271
NCBI-ProteinID:
XP_071020836
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Position
1:complement(42452779..42485295)
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AA seq
612 aa
AA seq
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MSPEQESNGLENDTFAIHGHFCELENDGEGSELSEEDDKNKLAYCVTDVPAWYLCIILGI
QHLLTAFGGIIAIPLILSQGLCLQHDGLTQGHLISTIFFVSGVCTLLQVTFGIRLPIVQG
GTFAFLAPSMAMLSMPEWTCPAWTQNASLVNTTSPEYIDVWQSRMRELQGSIMVGSLFQV
LVGFSGLIGFFMRFIGPLTIAPTISLIGLSLYDSAGMSAGNHWGISTMTTALIILFSQYL
RHIPVPFPTYNKTKKLHTSRIYIFQLLPVLLGITLSWLICYIFTISNVLPSEPEQYGYLA
RTDLKGDVISQAPWFRFPYPGQWGLPTVSLAGVLGILAGVLSSMIESVGDYHACARLSGA
PPPPKHAINRGIGIEGIGCLLAGAWGTGNGTTSYSENVGALGITKVGSRMVIVAGGVLMI
IMGLFCKIGAIFTTIPTPVIGGMFLVMFGVISAAGVSNLQYADMNSSRNVFIFGFSMFSG
LVIPNWIFKNPDAIATGVVELDQLLQVLLTTSMFIGGFFGFFLDNTIPGTLRERGIMDWN
KIPLDDSSNTLESSEVYNLPFGISSCLSSFSWVRYVPFLPPNAPSSQDEAKVDSLATKQQ
PVKPEVIRSVAL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagagcaggaaagcaatggtctcgaaaacgacacatttgctattcatggacat
ttctgtgagctggagaatgatggagagggctccgaactctctgaggaggatgacaagaac
aagctggcctactgtgtcacagacgtcccagcctggtacctatgcattatcctgggcatc
cagcatttactgacagcgtttggggggataattgccatccctctgatcctgtctcagggt
ctgtgtctgcagcacgatggcctgacccagggtcacctcatcagcaccatcttctttgtg
tcaggcgtgtgcaccctgctgcaggtcaccttcggaatcagactgcccattgttcagggg
ggtacctttgcctttctagctccctccatggctatgctgtcaatgccagagtggacatgc
cctgcctggacccagaacgcttccctggtcaacaccacctctcctgagtacatagatgtg
tggcagagccgcatgcgagagctgcagggctccatcatggtgggctctttgttccaggtg
ctggtgggtttctctggcctcatcggtttcttcatgcgttttattggcccccttaccatc
gcacccaccatctctctgattggcctgtccctgtatgactcggctggaatgagcgcaggg
aaccactggggcatctccactatgacaactgctctgatcatcctgttctcccagtacctc
cgacacatccctgtaccattccccacatacaacaagaccaagaaactccacacctccagg
atctacatcttccagcttctccctgtgctccttggcatcacactgtcatggctgatctgt
tacatcttcaccatctctaatgtcctgccctccgagccggagcagtacggctacctggct
cgcacagacctgaagggggatgtcataagccaggccccctggttcagattcccatatcca
ggtcagtggggtttgccaactgtgagcctggcgggagtgttagggatcttggctggggtg
ttatcctccatgatagagtcggtgggggactaccacgcctgtgccagactatcaggggcc
cctccaccccctaagcatgccatcaacaggggcattggcattgaggggattggctgtctg
ctggctggggcctggggcacgggcaacggaaccacctcctatagtgagaatgtgggtgca
ctgggcatcaccaaggtgggcagtcgcatggtgatcgttgctggtggggtattgatgatc
atcatgggacttttctgtaaaattggagcaattttcaccaccatccccacacctgtgatt
ggaggaatgttcttggtcatgttcggggtcatttctgcagctggagtttcaaatctgcag
tatgcagacatgaactcctcccggaatgtgtttatctttggattttccatgttttccggg
cttgtcattccaaactggatattcaagaacccggatgccatagcaacaggtgtggtcgag
ctggaccaactgctgcaggtgcttctaacaaccagcatgtttattggaggcttctttggg
ttcttccttgacaacaccattccaggcaccctgcgggagcggggcatcatggactggaac
aagatcccccttgatgactccagcaacactttggagagcagtgaggtgtacaaccttcca
tttggaattagctcttgtctctcctccttctcctgggttcgatatgtgccgttcctccct
ccaaatgcaccaagctcacaggacgaggccaaggtggactctttggcgaccaagcagcag
cctgtgaagccagaggttatcagatcagtggccctatga
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