Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139416296
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Entry
139416296 CDS
T10872
Name
(RefSeq) bromodomain adjacent to zinc finger domain protein 2B-like isoform X1
KO
K15224
bromodomain adjacent to zinc finger domain protein 2A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139416296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139416296
03036 Chromosome and associated proteins [BR:
ocla03036
]
139416296
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
139416296
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
NORC complex
139416296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Bromodomain
WSD
PHD
DDT
Motif
Other DBs
NCBI-GeneID:
139416296
NCBI-ProteinID:
XP_071020884
LinkDB
All DBs
Position
9:complement(41132870..41172213)
Genome browser
AA seq
2746 aa
AA seq
DB search
MMESNNHFNYGSHSSVSANSGLKLSSGDSLYSNRSSMSFPPQGKNMNGEMNVNGVTTVIG
PSVPGSQLPTASYPHMSNHHQSSMGYDYMWGGQPQYSPAMGSSPGHGMHQKQPPPGGMQQ
QSQHHFQGHGQYQLNGGMPGSRQPPVAAPPNVTLTGGQYWNRGNPGQQQSSTAMAMGYNS
QGVYGSYQSQVHPGIAPSQHHQQQPPQSSPHQQTQQHIHPHHHPHHQQQHQQQPQHYSMV
PNGIPYYQPQHPPLPAPQPQPPSQSQSQAQMMPPTSQNFTPPRGSPQHHHIGRGGTGSPL
PLGVSSVPMMSPSTMADSGSPQSQTRERSPHGGTVGMPAVMQGRMSEVFKDVDKGYNGME
RASVTQLLPKSDSYHPKPPGPPMGPTIDYCQRSEQPMAQHHEMATSARESAPPAPPHSMS
SHPPAVSAPSTHSRLSAPTAMSTPPMGTLGPPVVSSFSVSPAPPRNSAAPMSSSPSLPVH
GPPPGLSSPPLMSTRPSPVSLSTPPSVASPPSSVSVTLPKPPAPPLLLDKSSIPPAVSAP
HPVSAPPPVSVAHQTAPMTSAPPAMVSTPTMVGAPSRSMSAPISALQQMVQGSRPPPLTS
SPIALSGAPREKFWTPSISAVAPPPRVSVSPTAVSTTLVAVRQNSSAVPSPPWAVSAPSI
SVSSPPRSVSTPPPAVSAPSTESASAVSSSPKEVSMPPLTGQGPKAQAPGVSSMSEPPAL
VFVPRAVMTALHMVPSTPPAVSAPSLSIPAPPQAPKCMFSAEPKERDMGNKKAMGNKKEP
SVEPPGKLEASSPQPKVDPVRTPSKMDATKSFTRQSEKHSHKPLTDIPGTPPPPKDQENS
FVDKMCAERMDTAPLRHSYSLLERRGLDDTCETDESAFEESADESSQVSTCLDSTRMEKT
SFTEEDDACNDSSLNDTSQFGDTSRLGANSRMDDMSRLDDSFRVDGETSRFDDTSRMDED
CSRLDVTSQLDDSSRIDGGKSRFDDTSCLDDSSHMDHPSREDEISHVADTTIDSRFSSVD
DSRDLTLDDTQTEDSSQAEETIDSCLSTGVSMLDSSLNNTSQMEDSCVESSQNDVSRSSS
NGPAKPPPAYKGFEGECESEGQDIPDCAGTTKASAVSIMAPPVMDKGKHTAALSALVGNL
VAAPRLPLAAPAVPTTSQKTPRKPRKPRTPAASTPVPQVPGQAQRRSAVKTPKVDKIKVE
RKKKKKLEKGEVVEKKEKGPPRKRKKTESVAVTEEAERSAEGLLSGQSGPVTTINEPCLT
SGETPPAIKPKKVRVKNLEPMPPKIAKIDVNTKPNDGNNDNDGDDSSTAGDTPRRRIATE
EQVHFPLLHGWRREVRVRKTEDRLKGETWYYSPCGRRIKQFPEVIKYLNRHKDTAVTREH
FSFSPRMPVGDFYEEMDSAEGVKWCLLANEEVPSMIMAITGRRGRPPNPDKEKPRPRARR
TKGGLVRKPGRPPKPKMVDLLSKVDARMLERLEAKEALTEEDKEKLVKIKKKMKRKARMK
RKENNQNKKIRQEKKQAKLDKAKETKDQEVVKAEPADQEPPQPTPPQPPAPEPKKRGPRK
KKAEVPLPVVETDQERVAQGKRVLGARSKAKALAKAQAEAEAAAQAALAAKKQVERRAQS
QRRLEERKRQQMILEQLKKPTEDMCLTDHQPLPELSRIPGVVLSGVAFSHCLTVVEFLHS
YGKVLGLHIPMDVPSLSTLQESLLGLGDSQGEVQDLLIKLVEAALHDPGLPPYYQSVKIL
GEKLVDLELTRSTVSEGLRIFLESHGFDMEVCNVLRTKTFHALGPDTKAAILGFLVEVLN
GSNIVISEIDNTLENMATYRKNKWIIEGKLRKLKAALARRTGRSEEELCLEERRCSARVA
EEENLILQGTSFMQRGRRTPKEEPNLGDTDSPTNDSVPELERQIDKLTKRQVFFRKKLLQ
SSHSLRAVSLGQDRFRRRYWVLPHLGGVLVEGPEEILASEDILVKEVPITLLKRKPKVEE
TLTPTTPPAPLPSPLPPKSQTSFPPEEDPLPGTASLMSSPRARGRPRKIKPEVELHLRTA
KCRRRRRSSKSGGEETGPSVAPEATTNGSQDLTQSAFHNWLSHLQGAITNGTEPATGSQP
EDSVKEMAEKQGQWFNLLPKQPCDKTSLTEPQTPPSTPPKRFPLTPSTLPALAAPLLQSV
PAPSDSPPQVAPTQTPTPAKPGRRRRRGSRGSRGSSPARRVGARGAAAKRRGRPPSTLFQ
EIEQQYFTQLVVKPIPASMVRGWWWIKEPEELTATLQALHPRGIREKVLHKHLAKHMEYL
AEVCTRPINDTIFQVKVEVGEALLEALQQPWQVQERALETDVSALRWVEDLERRVTAADL
HLKMAPQNGRSDTDNSTETPGAGFQPYTVPEADSTRDDLRYYEHDTDPRDDWIVRTKKEW
SDLPRVASHPLDLAVLRLANLERNIDRRYLKEPLWNLAEVVRLAPLTPEESQMGQMDVMS
LESEITSRLRTWRQALDRCRSAPQLCLCLLQLEKAIAWERSVVKVTCQVCRKGDNDEYLL
LCDCCDRGCHMYCLRPKVTQVPEGDWFCPTCFSKASDGESPHSNQRSSKQRTRVKKRRYE
DDSSDEETVPSRRSGGGDGMAIRHKDGGPASSSSRYSGDGGCTTGFSPAKRRRMTTRNQP
DLTYCEIILMEMESHADAWPFLEPVNPRMVPGYRRIIKNPMDFLTMRERLLQGGYCSCEE
FAADAHLVFNNCEQFNEDTSEVGMAGHSMKRFFENRWAEFYESKDK
NT seq
8241 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcaaacaaccatttcaactatggcagccactcctctgtgtctgctaactca
ggactgaaactctcctcaggggattctctctattctaacaggtcctccatgagtttccct
ccacaggggaagaatatgaatggcgaaatgaatgtgaatggcgtcactactgtaattggg
cctagtgtgcctggctcccaacttccaacagcctcatacccccacatgagcaaccaccac
cagagtagcatgggctacgactacatgtggggaggacagccacagtacagcccagccatg
ggctcgtctcctgggcatggcatgcaccagaagcagcctccacctggggggatgcagcaa
cagagccagcaccacttccagggtcatggacagtaccaactgaacgggggcatgcctggg
tcccgtcagccacccgtggctgccccaccaaacgtgactcttacagggggccagtactgg
aacaggggtaacccggggcaacagcagagcagcacagccatggcaatggggtataactca
caaggtgtgtacgggtcctaccagagccaggtgcaccctgggattgcgccctcacagcat
caccagcagcagcctccacagtcatcccctcaccaacagacacagcagcacattcacccg
caccaccacccacaccaccagcagcaacaccagcagcaacctcagcactacagcatggta
cccaatgggattccctactaccagccccagcacccacctcttcccgctccacaaccccag
cccccatcccaatctcagtcccaggctcagatgatgccccctacctcccaaaatttcacc
cctccacggggcagcccacagcaccaccacattggccggggaggcactggcagccctctc
cccctgggggtgtcctctgtcccaatgatgtcaccctcgacaatggcggatagtggatcg
ccccagagccagaccagggagaggagtccccatggaggtactgtggggatgcctgctgtc
atgcaagggcggatgagtgaagtgtttaaggatgtggataaaggctataatgggatggag
agggcgtctgtcacccagctgctgcctaaaagcgacagctaccatcccaagccccctgga
cccccgatgggacctaccattgactactgccagcgctctgagcagccgatggcccagcac
catgaaatggcaacctcagcgagggagtctgcgccacctgcgcctccacactcgatgtcg
tcccatcctccggctgtgtctgcgccttccacccattctaggctctctgcacctactgct
atgtctactcctccaatgggtacattaggacctcctgtcgtttcatccttctctgttagt
cctgcgcctccccgaaactcagcggctcccatgtcctcttctccttctctccctgtgcat
ggacctcctcccgggctgtcttcgcctcctctgatgagcacaagaccttctccagtgtct
ttgtccacacctccatcagtggcatctccaccctcgtcagtgtctgtaactcttcccaag
ccacctgcaccacctcttctcctggacaaatcctctatacctccagctgtgtctgctccc
catccagtcagtgctcctcccccagtgtctgtggcacatcagactgctcccatgacatct
gcccctcctgcgatggtctctactcctactatggtgggtgctccctcgcgctccatgtct
gcacccatctctgcacttcagcagatggttcaaggatccagaccaccgcctttgacttcc
tctcccatagctttatctggagctcctcgagaaaagttttggactccatcaatatctgca
gttgcacctcccccaagggtttctgtgtcccccacagcggtgtctactaccttggtggca
gtaaggcaaaattcctcagcagtgcccagtcctccttgggcagtcagtgcaccttctata
tcagtgtcctcacctcctcgatctgtgtctactcctcccccagcagtttctgctccctcc
acagagtctgcgtctgcagtgtcctcgtctccaaaggaggtatctatgcctcctttaaca
ggtcaaggccctaaagctcaagcccccggagtttcttcaatgtctgagcctcctgccttg
gtgtttgtgcctcgtgcagtgatgactgctcttcatatggtcccctcaacccctcctgct
gtctctgcgccttccctatccattcctgctcctccacaagcccctaaatgcatgttttcc
gctgagccaaaggagcgagacatggggaataagaaggccatgggcaacaagaaggaaccc
tctgtagaaccacctggaaaactagaggcgagttctccacagccgaaagtcgacccagtt
agaacaccatcaaagatggatgccaccaagtcttttactcgtcaatctgaaaaacactca
cacaaacccctcacagatattcctgggactcctccgcctcccaaggaccaagagaactcc
tttgtcgacaaaatgtgtgcggagagaatggacaccgcccccctgagacactcatactct
ctcctggagagaagaggtctggatgacacctgtgagacggacgagtcagcgtttgaggag
tctgcggacgagtcgtcgcaggtgtccacgtgcctcgacagcaccaggatggagaaaacc
agctttactgaagaggatgacgcctgtaacgactcatcactcaacgacacatctcagttt
ggtgacacttctagacttggcgctaactctcgaatggatgacatgtctcgattggatgac
agcttccgtgtagatggtgaaacctctcggtttgatgatacctctcgcatggatgaagac
tgctctcgattggatgtcacctctcaattggatgacagctctcgcatagatggcggcaaa
tctcgatttgacgatacctcttgtttggatgacagctctcacatggatcacccctctcgt
gaggatgaaatatcacatgttgctgacactacaatagatagccgcttctcctctgtggat
gattccagggacttgacgctggatgatacccaaacagaggactcttcccaggcagaggag
accattgacagctgcctgagcaccggggtgtccatgctggattcctctctgaacaacacc
tctcagatggaggactcctgtgttgaatcctcccagaatgacgtctcccggtcaagctca
aatggccctgccaaaccacccccagcctacaaagggtttgaaggggaatgtgagtcggag
gggcaggatatacccgactgtgctggcaccaccaaggccagtgccgttagtatcatggct
ccccctgttatggacaaaggcaagcacacagcggcgctcagtgccctggtggggaacctg
gttgcagccccacgcctgcccttagccgccccagccgtacccaccaccagccaaaagaca
ccaaggaaacccaggaagccacgcactccagcagcctccactcccgttcctcaggtcccc
gggcaagcacagcggaggtccgctgttaaaactccaaaggtggataagataaaggtggag
aggaagaagaagaagaagcttgagaaaggagaggtcgtagagaaaaaggagaagggacca
ccaagaaagagaaagaagacagaatcagtagcagtcacagaagaggctgaacgttctgct
gaaggcttactttctggtcaaagtggaccagtcactaccatcaatgaaccatgtctgacc
agtggcgagaccccgccggccatcaaacccaagaaggttagggtcaagaatctggaaccg
atgccacccaaaatagcgaaaattgatgttaacactaaacccaatgatggcaataacgac
aatgacggagatgacagttccactgctggtgacacccccaggaggaggatagcaacagag
gagcaggtccacttccctctgctccatggctggaggagggaagtccgagtcaggaagact
gaggaccggctgaagggggagacctggtactacagcccctgtgggagaaggattaagcag
tttccagaagtcatcaagtacctgaacaggcacaaggacaccgctgtgaccagggaacac
ttcagcttcagcccccgcatgcccgtaggagatttctacgaggagatggactccgctgag
ggagtgaaatggtgcctcctggccaatgaggaggtgccttccatgatcatggccatcacg
ggccgccgcggccgacctccgaaccctgacaaagagaagccccgcccccgagctcggcgc
accaagggtgggctagtccgaaagcccggcaggccgcccaaaccaaagatggtggacctg
cttagcaaggttgacgccagaatgctggagaggctggaggccaaggaagctctgactgag
gaggacaaggagaaacttgtcaaaatcaagaagaaaatgaagagaaaggcaaggatgaaa
agaaaggagaataaccagaacaagaagatccgacaggagaaaaaacaagcgaagcttgac
aaagccaaggagaccaaggaccaggaggtggtgaaggctgaaccagccgaccaagaaccc
ccacagcctacccccccacaaccgcccgccccagagcccaaaaagcgtggccctaggaag
aagaaagctgaggtgcctttaccggtcgtggagacggaccaggagagggtagcccagggg
aagagagtgttgggggccaggagtaaggccaaggccctggctaaggcccaggcagaggcg
gaggctgcagcccaggcggccctggcagctaagaagcaggtggaaaggagagcccaatcc
cagagacggctggaggagaggaagagacagcagatgatcttggagcagctgaagaagccc
actgaggacatgtgtctcacagaccaccagccccttccggagctgtctcggatccctggc
gtggttctctctggcgtggccttctcccactgcctgactgtggtggagttcctacacagc
tatggcaaggtgctgggcctccacatccccatggacgtgcctagcctcagcacactgcag
gagagcctcctgggcctgggagacagccaaggcgaggtccaggatctgctcatcaagctg
gtggaggctgcactacacgacccaggcctgccaccgtactaccagtcagtgaagatccta
ggggagaagctggtggatctggagctgactcgcagcacagtgtccgagggcctgcgaatc
ttcctggagtcccacggctttgacatggaggtgtgcaacgtgctgcggaccaagaccttc
catgccctcggccctgacacaaaggctgccatcctgggcttcctggtggaggtcctcaac
ggtagcaacatcgtcattagtgagattgacaacacactggaaaacatggctacttacagg
aagaacaagtggatcatcgaggggaaattgcgcaaactgaaggcagctctagcacggcgt
acagggcgctctgaggaggagctgtgtctcgaggagaggaggtgcagtgccagggtggca
gaggaggagaacctcattctacaagggaccagcttcatgcagaggggccgccgcacaccc
aaggaggagcccaatctcggggacactgacagccccaccaatgacagcgttccagagttg
gagaggcagatcgataagctaacgaagcggcaggtgtttttccgtaagaagctgctccag
tcgtcccactccctgcgtgcggtctctctgggccaggaccggttccgccggagatactgg
gtcctgccccacctgggaggggtgctggtggaggggcctgaggagatcctagcgtcagag
gatatcctggtgaaggaggtgcctatcactcttctgaagaggaaacctaaagtggaggag
acgctcactcctacaacccctcctgcccccctcccatcccctctccctcccaagtctcag
acttccttcccccctgaggaggaccccctccctggcactgcctctctcatgagcagcccc
agggcccgtggtcgcccccgcaagatcaaaccagaggtggagctacacctccgcactgcc
aagtgtcgccgccgtcgccgtagcagcaagtccggcggggaggagactgggccaagcgtt
gccccagaggccaccaccaacggctcacaagacctcacgcagtccgccttccacaactgg
ctcagccacttgcagggcgccataactaacgggacggagccagcaacaggcagccaacca
gaggacagtgtgaaggagatggcggagaaacaggggcagtggttcaacttgctgcccaaa
cagccgtgtgacaaaacctctctgacagaaccccagaccccccccagcaccccccccaaa
cgcttccctctgacccccagcaccctgcccgccctcgccgctccactgctgcagtctgtc
ccagccccctcggactccccaccccaggtggcccctacccagacccccaccccagccaaa
ccggggcgcaggcggaggaggggcagcaggggcagcaggggcagcagtcccgcccgtagg
gttggggctagaggggctgcagctaagcgtcgtggccgccctccttccacgctcttccag
gagatagagcagcagtacttcactcagctcgtggtcaagcccattccagcatcgatggtg
cgtggctggtggtggatcaaggagcctgaggagctgacggctaccctgcaggccctgcac
ccgcgaggcatacgggagaaggtactccacaaacacctggccaaacacatggagtacctg
gctgaggtctgcacacgacccatcaacgacactatattccaggtgaaggtggaggtcggc
gaggccctgctggaggctctgcagcagccgtggcaggtccaggagcgggctttggagaca
gacgtcagcgccctccgctgggtggaggacctggagcggagggtcaccgccgctgacctg
cacctcaagatggctccccagaatggaaggagtgacactgacaatagcacggaaacgcca
ggcgcaggattccagccctacacggtcccagaggcagactccacacgtgacgacctgcgg
tactacgagcatgacacggacccccgggatgactggatcgtgcggaccaagaaggagtgg
tcggacctgccccgcgtggccagtcacccgctggacctggcagtgctgcgcctggccaac
ctggagaggaacatcgaccggcgctacctgaaggagcccctctggaatctggctgaggtg
gtacgtctcgccccgctcacccccgaggagagccagatgggccagatggacgtcatgagc
ctggagagtgagataacctccaggttgcggacatggcgtcaggccctggatcgttgtcgg
agcgccccccagctgtgtctgtgtctgctgcagctggagaaggccatcgcctgggaaaga
tccgtggtcaaagtgacgtgtcaagtgtgcaggaagggggataatgatgagtacctgctg
ctgtgtgactgctgtgaccgcggctgccacatgtactgcctgaggccaaaggtcacccag
gtgccagagggggactggttctgccccacctgtttctccaaggcgagtgacggtgagtca
ccacatagcaaccagcgctcctccaagcagaggacccgggtgaagaagaggaggtacgaa
gacgacagttctgacgaggagacggtgcccagcagacgtagtggcggtggtgatggcatg
gcaatacgacataaggacggcggccccgcctcctcctcctcccgttactcgggagacggg
ggatgcacgacgggcttctcgcccgccaagcgccgccgcatgaccacccgcaaccagccc
gacctcacctactgcgaaatcatccttatggagatggagtctcacgctgacgcctggccc
ttcctggagccagtcaacccccgcatggtgcctggctaccgacgcatcatcaagaacccc
atggacttcctcaccatgagggagaggctgctacagggagggtactgcagctgtgaggag
tttgcagcggacgcccatctggtgttcaacaactgcgagcagttcaacgaggacacctcc
gaggtgggcatggctggacactccatgaagcgcttcttcgagaaccgctgggcggagttc
tacgagagcaaggacaaatag
DBGET
integrated database retrieval system
